Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC25.68■■□□□ 1.7
CHD2O14647 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC25.68■■□□□ 1.7
CHD2O14647 AC107918.4-202ENST00000641623 219 ntBASIC25.68■■□□□ 1.7
CHD2O14647 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHD2O14647 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHD2O14647 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHD2O14647 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CHD2O14647 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CHD2O14647 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CHD2O14647 AL024508.2-201ENST00000607749 1894 ntBASIC25.68■■□□□ 1.7
CHD2O14647 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC25.68■■□□□ 1.7
CHD2O14647 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHD2O14647 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CHD2O14647 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHD2O14647 LBH-203ENST00000404397 543 ntTSL 4 BASIC25.67■■□□□ 1.7
CHD2O14647 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC25.67■■□□□ 1.7
CHD2O14647 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC25.67■■□□□ 1.7
CHD2O14647 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHD2O14647 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CHD2O14647 AC125634.1-201ENST00000438758 1403 ntBASIC25.67■■□□□ 1.7
CHD2O14647 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CHD2O14647 AL163051.1-201ENST00000569214 1512 ntBASIC25.67■■□□□ 1.7
CHD2O14647 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHD2O14647 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CHD2O14647 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC25.67■■□□□ 1.7
CHD2O14647 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
CHD2O14647 MIR149-201ENST00000384879 89 ntBASIC25.67■■□□□ 1.7
CHD2O14647 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
CHD2O14647 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC25.67■■□□□ 1.7
CHD2O14647 MIR3687-2-201ENST00000577708 61 ntBASIC25.67■■□□□ 1.7
CHD2O14647 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CHD2O14647 MIR3687-1-201ENST00000614492 61 ntBASIC25.67■■□□□ 1.7
CHD2O14647 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHD2O14647 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC25.67■■□□□ 1.7
CHD2O14647 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC25.67■■□□□ 1.7
CHD2O14647 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHD2O14647 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHD2O14647 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHD2O14647 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC25.66■■□□□ 1.7
CHD2O14647 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHD2O14647 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC25.66■■□□□ 1.7
CHD2O14647 COPE-211ENST00000600932 1144 ntTSL 5 BASIC25.66■■□□□ 1.7
CHD2O14647 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHD2O14647 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
CHD2O14647 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC25.66■■□□□ 1.7
CHD2O14647 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHD2O14647 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHD2O14647 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHD2O14647 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHD2O14647 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC25.65■■□□□ 1.7
CHD2O14647 AC068472.1-201ENST00000474589 881 ntBASIC25.65■■□□□ 1.7
CHD2O14647 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHD2O14647 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC25.65■■□□□ 1.7
CHD2O14647 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHD2O14647 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC25.65■■□□□ 1.7
CHD2O14647 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
CHD2O14647 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHD2O14647 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHD2O14647 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.65■■□□□ 1.7
CHD2O14647 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHD2O14647 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC25.65■■□□□ 1.7
CHD2O14647 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC25.65■■□□□ 1.7
CHD2O14647 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CHD2O14647 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC25.65■■□□□ 1.7
CHD2O14647 INIP-202ENST00000374236 874 ntTSL 2 BASIC25.65■■□□□ 1.7
CHD2O14647 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CHD2O14647 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC25.65■■□□□ 1.7
CHD2O14647 CFL1-212ENST00000531413 636 ntTSL 3 BASIC25.65■■□□□ 1.7
CHD2O14647 COX5A-204ENST00000567270 579 ntTSL 3 BASIC25.65■■□□□ 1.7
CHD2O14647 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC25.65■■□□□ 1.7
CHD2O14647 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHD2O14647 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CHD2O14647 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHD2O14647 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC25.64■■□□□ 1.7
CHD2O14647 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC25.64■■□□□ 1.7
CHD2O14647 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHD2O14647 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC25.64■■□□□ 1.7
CHD2O14647 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHD2O14647 CENPM-204ENST00000402420 688 ntTSL 5 BASIC25.64■■□□□ 1.7
CHD2O14647 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC25.64■■□□□ 1.7
CHD2O14647 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC25.64■■□□□ 1.7
CHD2O14647 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHD2O14647 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHD2O14647 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
CHD2O14647 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHD2O14647 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CHD2O14647 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD2O14647 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHD2O14647 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CHD2O14647 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHD2O14647 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC25.63■■□□□ 1.69
CHD2O14647 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHD2O14647 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC25.63■■□□□ 1.69
CHD2O14647 RNF151-202ENST00000569210 853 ntTSL 2 BASIC25.63■■□□□ 1.69
CHD2O14647 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD2O14647 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD2O14647 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD2O14647 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC25.63■■□□□ 1.69
CHD2O14647 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHD2O14647 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms