Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDC7O00311 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC7O00311 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.19■□□□□ 0.5
CDC7O00311 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.19■□□□□ 0.5
CDC7O00311 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC7O00311 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.19■□□□□ 0.5
CDC7O00311 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC7O00311 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC7O00311 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC7O00311 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC7O00311 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CDC7O00311 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.19■□□□□ 0.5
CDC7O00311 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.19■□□□□ 0.5
CDC7O00311 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.19■□□□□ 0.5
CDC7O00311 AL162741.1-201ENST00000565563 1558 ntBASIC18.19■□□□□ 0.5
CDC7O00311 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.19■□□□□ 0.5
CDC7O00311 NOC2LP1-202ENST00000452600 2235 ntBASIC18.19■□□□□ 0.5
CDC7O00311 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC7O00311 AC034236.2-201ENST00000606662 1610 ntBASIC18.19■□□□□ 0.5
CDC7O00311 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC7O00311 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC7O00311 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDC7O00311 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.18■□□□□ 0.5
CDC7O00311 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.18■□□□□ 0.5
CDC7O00311 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.18■□□□□ 0.5
CDC7O00311 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC7O00311 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDC7O00311 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.18■□□□□ 0.5
CDC7O00311 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.18■□□□□ 0.5
CDC7O00311 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.18■□□□□ 0.5
CDC7O00311 KRT8P50-201ENST00000562022 1438 ntBASIC18.18■□□□□ 0.5
CDC7O00311 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.18■□□□□ 0.5
CDC7O00311 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC7O00311 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.18■□□□□ 0.5
CDC7O00311 SLC25A1P2-201ENST00000430693 912 ntBASIC18.18■□□□□ 0.5
CDC7O00311 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.18■□□□□ 0.5
CDC7O00311 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.18■□□□□ 0.5
CDC7O00311 AL353719.1-201ENST00000566847 864 ntBASIC18.18■□□□□ 0.5
CDC7O00311 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC7O00311 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC7O00311 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDC7O00311 AL133373.2-201ENST00000623187 2828 ntBASIC18.18■□□□□ 0.5
CDC7O00311 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC7O00311 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDC7O00311 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.18■□□□□ 0.5
CDC7O00311 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC7O00311 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDC7O00311 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CDC7O00311 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.18■□□□□ 0.5
CDC7O00311 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC7O00311 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDC7O00311 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDC7O00311 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.18■□□□□ 0.5
CDC7O00311 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.17■□□□□ 0.5
CDC7O00311 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC7O00311 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC7O00311 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CDC7O00311 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDC7O00311 ESPNP-201ENST00000270691 2015 ntBASIC18.17■□□□□ 0.5
CDC7O00311 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC7O00311 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDC7O00311 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
CDC7O00311 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.17■□□□□ 0.5
CDC7O00311 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDC7O00311 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.17■□□□□ 0.5
CDC7O00311 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.17■□□□□ 0.5
CDC7O00311 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.17■□□□□ 0.5
CDC7O00311 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.17■□□□□ 0.5
CDC7O00311 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.17■□□□□ 0.5
CDC7O00311 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDC7O00311 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC7O00311 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC7O00311 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC7O00311 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDC7O00311 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC7O00311 AC138932.1-201ENST00000534164 6830 ntBASIC18.17■□□□□ 0.5
CDC7O00311 KRT17P2-201ENST00000300992 1314 ntBASIC18.17■□□□□ 0.5
CDC7O00311 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDC7O00311 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDC7O00311 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.16■□□□□ 0.5
CDC7O00311 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDC7O00311 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDC7O00311 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDC7O00311 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC7O00311 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDC7O00311 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDC7O00311 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC7O00311 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDC7O00311 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.16■□□□□ 0.5
CDC7O00311 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC7O00311 MIR4497-201ENST00000583208 89 ntBASIC18.16■□□□□ 0.5
CDC7O00311 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.16■□□□□ 0.5
CDC7O00311 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC7O00311 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC7O00311 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDC7O00311 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDC7O00311 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.16■□□□□ 0.5
CDC7O00311 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.16■□□□□ 0.5
CDC7O00311 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.16■□□□□ 0.5
CDC7O00311 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms