Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 LINC00896-202ENST00000609602 2128 ntBASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 AC012317.2-201ENST00000623305 2251 ntBASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 GATB-213ENST00000515812 1893 ntTSL 5 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 MIR4281-201ENST00000580852 62 ntBASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHKB-CPT1BH3BT56 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 MFF-207ENST00000409565 1548 ntTSL 2 BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CHKB-CPT1BH3BT56 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms