Protein–RNA interactions for Protein: A6NI56

CCDC154, Coiled-coil domain-containing protein 154, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC154A6NI56 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC154A6NI56 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC154A6NI56 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC154A6NI56 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC154A6NI56 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC154A6NI56 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC154A6NI56 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC154A6NI56 AC093677.2-201ENST00000600169 1863 ntBASIC17.8■□□□□ 0.44
CCDC154A6NI56 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC154A6NI56 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC154A6NI56 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC154A6NI56 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 ESRRAP1-201ENST00000400596 1257 ntBASIC17.79■□□□□ 0.44
CCDC154A6NI56 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC154A6NI56 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC154A6NI56 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.78■□□□□ 0.44
CCDC154A6NI56 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 AC124016.1-201ENST00000609552 612 ntBASIC17.78■□□□□ 0.44
CCDC154A6NI56 AL445675.2-201ENST00000620291 557 ntBASIC17.78■□□□□ 0.44
CCDC154A6NI56 AC131212.4-201ENST00000623606 975 ntBASIC17.78■□□□□ 0.44
CCDC154A6NI56 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC154A6NI56 GNAS-203ENST00000306120 1878 ntBASIC17.78■□□□□ 0.44
CCDC154A6NI56 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC154A6NI56 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC154A6NI56 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC154A6NI56 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC154A6NI56 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC154A6NI56 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC154A6NI56 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC154A6NI56 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC154A6NI56 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC154A6NI56 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC154A6NI56 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC154A6NI56 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC154A6NI56 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC154A6NI56 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms