Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCDHGC4Q9Y5F7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 WIZP1-201ENST00000531444 2299 ntBASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGC4Q9Y5F7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 MYLKP1-201ENST00000509077 1580 ntBASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 AC063952.2-201ENST00000498792 1227 ntBASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 AC010240.3-201ENST00000607688 395 ntBASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGC4Q9Y5F7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 AP000593.1-201ENST00000393668 712 ntBASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 MYC-208ENST00000641036 567 ntBASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC4Q9Y5F7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 AL138781.2-201ENST00000617896 1843 ntBASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 KRT18P38-201ENST00000449496 1282 ntBASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 AC092647.4-201ENST00000457211 535 ntBASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 AL359075.1-203ENST00000462729 1002 ntBASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 AC022616.7-201ENST00000525383 220 ntBASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGC4Q9Y5F7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms