Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHA4Q9UN74 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 AC090164.3-201ENST00000610780 2143 ntBASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 TMPOP1-202ENST00000424642 1267 ntBASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 KRT18P21-201ENST00000515767 1272 ntBASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 MIR3917-201ENST00000580971 93 ntBASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 AC009113.1-201ENST00000570267 2443 ntBASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 AC104581.1-202ENST00000635932 2618 ntBASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHA4Q9UN74 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 MIR149-201ENST00000384879 89 ntBASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHA4Q9UN74 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 AC009102.3-201ENST00000623118 1491 ntBASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 RNF152P1-201ENST00000397754 604 ntBASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 AK4P3-201ENST00000418260 669 ntBASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 FAM210CP-201ENST00000445714 574 ntBASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHA4Q9UN74 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms