Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 KRT8P3-201ENST00000519669 1449 ntBASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
HDAC6Q9UBN7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 AC092119.3-201ENST00000612618 583 ntBASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.92■□□□□ 0.94
HDAC6Q9UBN7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 SEC1P-202ENST00000473944 940 ntBASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 AL138781.2-201ENST00000617896 1843 ntBASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.91■□□□□ 0.94
HDAC6Q9UBN7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 AC104581.1-202ENST00000635932 2618 ntBASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 CROCCP3-202ENST00000420820 1947 ntBASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms