Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.08□□□□□ -0.16
VGLL1Q99990 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.08□□□□□ -0.16
VGLL1Q99990 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.08□□□□□ -0.16
VGLL1Q99990 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.08□□□□□ -0.16
VGLL1Q99990 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.08□□□□□ -0.16
VGLL1Q99990 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.08□□□□□ -0.16
VGLL1Q99990 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.08□□□□□ -0.16
VGLL1Q99990 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.08□□□□□ -0.16
VGLL1Q99990 AC068587.9-201ENST00000641814 219 ntBASIC14.08□□□□□ -0.16
VGLL1Q99990 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
VGLL1Q99990 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.08□□□□□ -0.16
VGLL1Q99990 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.08□□□□□ -0.16
VGLL1Q99990 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VGLL1Q99990 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.08□□□□□ -0.16
VGLL1Q99990 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
VGLL1Q99990 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.07□□□□□ -0.16
VGLL1Q99990 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.07□□□□□ -0.16
VGLL1Q99990 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.07□□□□□ -0.16
VGLL1Q99990 POU5F1P3-201ENST00000428824 1078 ntBASIC14.07□□□□□ -0.16
VGLL1Q99990 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.07□□□□□ -0.16
VGLL1Q99990 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.07□□□□□ -0.16
VGLL1Q99990 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.07□□□□□ -0.16
VGLL1Q99990 AC233263.1-201ENST00000578059 224 ntBASIC14.07□□□□□ -0.16
VGLL1Q99990 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VGLL1Q99990 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.07□□□□□ -0.16
VGLL1Q99990 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VGLL1Q99990 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.07□□□□□ -0.16
VGLL1Q99990 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.07□□□□□ -0.16
VGLL1Q99990 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.07□□□□□ -0.16
VGLL1Q99990 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VGLL1Q99990 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VGLL1Q99990 KRT8P11-201ENST00000409686 1436 ntBASIC14.07□□□□□ -0.16
VGLL1Q99990 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
VGLL1Q99990 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.06□□□□□ -0.16
VGLL1Q99990 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.06□□□□□ -0.16
VGLL1Q99990 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
VGLL1Q99990 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 CROCCP1-201ENST00000426910 5675 ntBASIC14.06□□□□□ -0.16
VGLL1Q99990 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.06□□□□□ -0.16
VGLL1Q99990 KRT17P3-201ENST00000420566 1262 ntBASIC14.06□□□□□ -0.16
VGLL1Q99990 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.06□□□□□ -0.16
VGLL1Q99990 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 AP003097.1-201ENST00000530657 1135 ntBASIC14.06□□□□□ -0.16
VGLL1Q99990 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.06□□□□□ -0.16
VGLL1Q99990 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.06□□□□□ -0.16
VGLL1Q99990 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.06□□□□□ -0.16
VGLL1Q99990 AC069544.1-201ENST00000609399 999 ntBASIC14.06□□□□□ -0.16
VGLL1Q99990 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.06□□□□□ -0.16
VGLL1Q99990 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VGLL1Q99990 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.06□□□□□ -0.16
VGLL1Q99990 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VGLL1Q99990 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms