Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 AC005332.1-201ENST00000577698 1310 ntBASIC19.5■□□□□ 0.71
SMARCD1Q96GM5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 PCED1CP-201ENST00000419887 785 ntBASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
SMARCD1Q96GM5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 MIR149-201ENST00000384879 89 ntBASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 AP000550.4-202ENST00000639755 178 ntBASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.48■□□□□ 0.71
SMARCD1Q96GM5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 AC009102.3-201ENST00000623118 1491 ntBASIC19.47■□□□□ 0.71
SMARCD1Q96GM5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 IER3-202ENST00000376377 1350 ntBASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 AL645929.1-201ENST00000420084 975 ntBASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCD1Q96GM5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 AC116407.4-201ENST00000623319 1061 ntBASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.45■□□□□ 0.7
SMARCD1Q96GM5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms