Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 ANO7L1-203ENST00000602586 1720 ntBASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 AL162741.1-201ENST00000565563 1558 ntBASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GRAMD1AQ96CP6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 PRORSD1P-202ENST00000563365 2154 ntBASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GRAMD1AQ96CP6 FSCN1P1-201ENST00000568912 1481 ntBASIC19.02■□□□□ 0.63
GRAMD1AQ96CP6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.02■□□□□ 0.63
GRAMD1AQ96CP6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 TERF1P1-201ENST00000311003 1181 ntBASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 AC010947.1-201ENST00000623454 693 ntBASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
GRAMD1AQ96CP6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
GRAMD1AQ96CP6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GRAMD1AQ96CP6 KRT8P9-201ENST00000558927 1449 ntBASIC19■□□□□ 0.63
GRAMD1AQ96CP6 AC073508.3-201ENST00000619697 1419 ntBASIC19■□□□□ 0.63
GRAMD1AQ96CP6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GRAMD1AQ96CP6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
GRAMD1AQ96CP6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19■□□□□ 0.63
GRAMD1AQ96CP6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19■□□□□ 0.63
GRAMD1AQ96CP6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GRAMD1AQ96CP6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms