Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 AC126763.1-201ENST00000552015 2118 ntBASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 NAPSB-206ENST00000562112 1266 ntBASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 C2orf69P3-201ENST00000565542 1120 ntBASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIMC1Q8NDZ2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.46■□□□□ 0.39
SIMC1Q8NDZ2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SIMC1Q8NDZ2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SIMC1Q8NDZ2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 AL109659.2-201ENST00000606809 1674 ntBASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 EGLN1P1-201ENST00000531623 762 ntBASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 FAM87A-204ENST00000613235 858 ntBASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 AC036111.1-201ENST00000533973 1582 ntBASIC17.45■□□□□ 0.38
SIMC1Q8NDZ2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIMC1Q8NDZ2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms