Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 AC036111.1-201ENST00000533973 1582 ntBASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 BCL2-203ENST00000589955 5011 ntBASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC116Q8IYX3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 AC034236.2-201ENST00000606662 1610 ntBASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 AC128688.1-201ENST00000487626 519 ntBASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCDC116Q8IYX3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 MYLKP1-201ENST00000509077 1580 ntBASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 CR769767.2-201ENST00000622735 460 ntBASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 AC010653.2-201ENST00000623505 997 ntBASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC116Q8IYX3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms