Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 STARP1-201ENST00000397973 869 ntBASIC17.7■□□□□ 0.42
RAB43Q86YS6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.7■□□□□ 0.42
RAB43Q86YS6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB43Q86YS6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RAB43Q86YS6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB43Q86YS6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB43Q86YS6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB43Q86YS6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.7■□□□□ 0.42
RAB43Q86YS6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB43Q86YS6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB43Q86YS6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB43Q86YS6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.7■□□□□ 0.42
RAB43Q86YS6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB43Q86YS6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.69■□□□□ 0.42
RAB43Q86YS6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 AC112907.2-201ENST00000448639 330 ntBASIC17.69■□□□□ 0.42
RAB43Q86YS6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 MIR4674-201ENST00000582457 87 ntBASIC17.69■□□□□ 0.42
RAB43Q86YS6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 CR769767.2-201ENST00000622735 460 ntBASIC17.69■□□□□ 0.42
RAB43Q86YS6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
RAB43Q86YS6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAB43Q86YS6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 KRT18P38-201ENST00000449496 1282 ntBASIC17.68■□□□□ 0.42
RAB43Q86YS6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 VENTXP5-201ENST00000523979 775 ntBASIC17.68■□□□□ 0.42
RAB43Q86YS6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 GCSHP2-201ENST00000560971 527 ntBASIC17.68■□□□□ 0.42
RAB43Q86YS6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
RAB43Q86YS6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAB43Q86YS6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 FZD10-202ENST00000539839 3282 ntBASIC17.67■□□□□ 0.42
RAB43Q86YS6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB43Q86YS6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms