Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.392e-6■■□□□ 12.2
LARP4Q71RC2 C2-211ENST00000469372 1906 ntTSL 2 BASIC12.16□□□□□ -0.461e-15■■□□□ 12.2
LARP4Q71RC2 C2orf82-208ENST00000481155 660 ntTSL 320■□□□□ 0.792e-7■■□□□ 12.2
LARP4Q71RC2 CAMSAP3-204ENST00000595692 1667 ntTSL 225.59■■□□□ 1.692e-11■■□□□ 12.2
LARP4Q71RC2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.762e-13■■□□□ 12.2
LARP4Q71RC2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.232e-13■■□□□ 12.2
LARP4Q71RC2 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.882e-13■■□□□ 12.2
LARP4Q71RC2 HNRNPA3-203ENST00000432457 643 ntTSL 39.34□□□□□ -0.912e-13■■□□□ 12.2
LARP4Q71RC2 HNRNPA3-205ENST00000483137 627 ntTSL 27.54□□□□□ -1.22e-13■■□□□ 12.2
LARP4Q71RC2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.218e-7■■□□□ 12.2
LARP4Q71RC2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.798e-7■■□□□ 12.2
LARP4Q71RC2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.89■□□□□ 0.778e-7■■□□□ 12.2
LARP4Q71RC2 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC7.97□□□□□ -1.133e-9■■□□□ 12.2
LARP4Q71RC2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.01□□□□□ -0.015e-9■■□□□ 12.2
LARP4Q71RC2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.035e-9■■□□□ 12.2
LARP4Q71RC2 HM13-218ENST00000487281 757 ntTSL 314.31□□□□□ -0.125e-9■■□□□ 12.2
LARP4Q71RC2 HM13-220ENST00000492709 1248 ntTSL 513.57□□□□□ -0.245e-9■■□□□ 12.2
LARP4Q71RC2 HM13-211ENST00000468559 675 ntTSL 511.61□□□□□ -0.555e-9■■□□□ 12.2
LARP4Q71RC2 HM13-204ENST00000398174 3792 ntTSL 1 (best) BASIC10.73□□□□□ -0.695e-9■■□□□ 12.2
LARP4Q71RC2 HM13-212ENST00000469097 801 ntTSL 510.39□□□□□ -0.755e-9■■□□□ 12.2
LARP4Q71RC2 HM13-225ENST00000619859 455 ntTSL 36.15□□□□□ -1.425e-9■■□□□ 12.2
LARP4Q71RC2 CANX-218ENST00000514032 1876 ntTSL 220.38■□□□□ 0.856e-30■■□□□ 12.2
LARP4Q71RC2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.036e-30■■□□□ 12.2
LARP4Q71RC2 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.276e-30■■□□□ 12.2
LARP4Q71RC2 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.46e-30■■□□□ 12.2
LARP4Q71RC2 CANX-210ENST00000505090 485 ntTSL 28.59□□□□□ -1.036e-30■■□□□ 12.2
LARP4Q71RC2 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.252e-15■■□□□ 12.2
LARP4Q71RC2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.582e-15■■□□□ 12.2
LARP4Q71RC2 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.98□□□□□ -0.178e-12■■□□□ 12.2
LARP4Q71RC2 GAS5-214ENST00000436656 822 ntTSL 38.66□□□□□ -1.028e-12■■□□□ 12.2
LARP4Q71RC2 GAS5-216ENST00000443799 897 ntTSL 58.66□□□□□ -1.028e-12■■□□□ 12.2
LARP4Q71RC2 GAS5-210ENST00000431268 1698 ntTSL 28.08□□□□□ -1.128e-12■■□□□ 12.2
LARP4Q71RC2 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.48□□□□□ -1.218e-12■■□□□ 12.2
LARP4Q71RC2 GAS5-220ENST00000449589 712 ntTSL 37.48□□□□□ -1.218e-12■■□□□ 12.2
LARP4Q71RC2 GAS5-226ENST00000455838 632 ntTSL 27.48□□□□□ -1.218e-12■■□□□ 12.2
LARP4Q71RC2 GAS5-203ENST00000416952 799 ntTSL 27.44□□□□□ -1.228e-12■■□□□ 12.2
LARP4Q71RC2 GAS5-227ENST00000456293 583 ntTSL 36.62□□□□□ -1.358e-12■■□□□ 12.2
LARP4Q71RC2 GAS5-204ENST00000421068 1060 ntTSL 25.42□□□□□ -1.548e-12■■□□□ 12.2
LARP4Q71RC2 GAS5-201ENST00000412059 979 ntTSL 55.06□□□□□ -1.68e-12■■□□□ 12.2
LARP4Q71RC2 GAS5-229ENST00000458220 469 ntTSL 24.91□□□□□ -1.628e-12■■□□□ 12.2
LARP4Q71RC2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.25□□□□□ -1.738e-12■■□□□ 12.2
LARP4Q71RC2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.69□□□□□ -1.828e-12■■□□□ 12.2
LARP4Q71RC2 RPS7-205ENST00000462576 907 ntTSL 1 (best)23.86■■□□□ 1.415e-10■■□□□ 12.2
LARP4Q71RC2 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.375e-10■■□□□ 12.2
LARP4Q71RC2 RPS7-204ENST00000407445 833 ntTSL 2 BASIC8.38□□□□□ -1.075e-10■■□□□ 12.2
LARP4Q71RC2 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.345e-10■■□□□ 12.2
LARP4Q71RC2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.021e-18■■□□□ 12.2
LARP4Q71RC2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.69■□□□□ 0.91e-18■■□□□ 12.2
LARP4Q71RC2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.96■□□□□ 0.791e-18■■□□□ 12.2
LARP4Q71RC2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.85■□□□□ 0.611e-18■■□□□ 12.2
LARP4Q71RC2 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.53□□□□□ -0.241e-18■■□□□ 12.2
LARP4Q71RC2 XBP1-206ENST00000484256 2173 ntTSL 211.34□□□□□ -0.591e-18■■□□□ 12.2
LARP4Q71RC2 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.98□□□□□ -0.333e-8■■□□□ 12.2
LARP4Q71RC2 CX3CL1-201ENST00000006053 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.723e-8■■□□□ 12.2
LARP4Q71RC2 CX3CL1-202ENST00000563383 3313 ntTSL 5 BASIC10.19□□□□□ -0.783e-8■■□□□ 12.2
LARP4Q71RC2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.121e-6■■□□□ 12.2
LARP4Q71RC2 AKAP1-209ENST00000572560 442 ntTSL 314.2□□□□□ -0.141e-6■■□□□ 12.2
LARP4Q71RC2 AKAP1-214ENST00000575032 570 ntTSL 313.62□□□□□ -0.231e-6■■□□□ 12.2
LARP4Q71RC2 AKAP1-219ENST00000621116 4285 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.641e-6■■□□□ 12.2
LARP4Q71RC2 AKAP1-203ENST00000481416 4089 ntTSL 59.94□□□□□ -0.821e-6■■□□□ 12.2
LARP4Q71RC2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.22e-8■■□□□ 12.2
LARP4Q71RC2 ACTN4-204ENST00000440400 3180 ntTSL 512.99□□□□□ -0.332e-8■■□□□ 12.2
LARP4Q71RC2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.061e-8■■□□□ 12.2
LARP4Q71RC2 MTCH2-206ENST00000539759 581 ntTSL 55.31□□□□□ -1.561e-8■■□□□ 12.2
LARP4Q71RC2 MTCH2-205ENST00000534074 811 ntTSL 24.65□□□□□ -1.671e-8■■□□□ 12.2
LARP4Q71RC2 MTCH2-202ENST00000525649 599 ntTSL 24.01□□□□□ -1.771e-8■■□□□ 12.2
LARP4Q71RC2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.081e-25■■□□□ 12.2
LARP4Q71RC2 AC002094.3-201ENST00000555059 851 ntAPPRIS P1 TSL 4 BASIC9.69□□□□□ -0.861e-25■■□□□ 12.2
LARP4Q71RC2 CARHSP1-207ENST00000565287 556 ntTSL 312.41□□□□□ -0.429e-8■■□□□ 12.2
LARP4Q71RC2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.732e-6■■□□□ 12.2
LARP4Q71RC2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.22e-6■■□□□ 12.2
LARP4Q71RC2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.152e-6■■□□□ 12.2
LARP4Q71RC2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.632e-6■■□□□ 12.2
LARP4Q71RC2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.02■□□□□ 0.322e-6■■□□□ 12.2
LARP4Q71RC2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.376e-8■■□□□ 12.2
LARP4Q71RC2 QSOX1-204ENST00000443059 893 ntTSL 213.38□□□□□ -0.276e-8■■□□□ 12.2
LARP4Q71RC2 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.536e-8■■□□□ 12.2
LARP4Q71RC2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.031e-17■■□□□ 12.2
LARP4Q71RC2 TRIM28-206ENST00000595974 665 ntTSL 314.83□□□□□ -0.042e-10■■□□□ 12.2
LARP4Q71RC2 TOMM20-201ENST00000366607 3387 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.582e-10■■□□□ 12.2
LARP4Q71RC2 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.171e-17■■□□□ 12.2
LARP4Q71RC2 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.03□□□□□ -1.441e-17■■□□□ 12.2
LARP4Q71RC2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.47□□□□□ -1.531e-17■■□□□ 12.2
LARP4Q71RC2 ILVBL-210ENST00000534806 1033 ntTSL 511.99□□□□□ -0.495e-8■■□□□ 12.2
LARP4Q71RC2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.21e-15■■□□□ 12.1
LARP4Q71RC2 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.231e-15■■□□□ 12.1
LARP4Q71RC2 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.59□□□□□ -0.231e-15■■□□□ 12.1
LARP4Q71RC2 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.331e-15■■□□□ 12.1
LARP4Q71RC2 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.91□□□□□ -0.341e-15■■□□□ 12.1
LARP4Q71RC2 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.361e-15■■□□□ 12.1
LARP4Q71RC2 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC10.77□□□□□ -0.691e-15■■□□□ 12.1
LARP4Q71RC2 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.41e-14■■□□□ 12.1
LARP4Q71RC2 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC12.3□□□□□ -0.441e-14■■□□□ 12.1
LARP4Q71RC2 RPL27A-203ENST00000525981 297 ntTSL 513.23□□□□□ -0.292e-19■■□□□ 12.1
LARP4Q71RC2 RPL27A-204ENST00000526562 519 ntTSL 2 BASIC10.37□□□□□ -0.752e-19■■□□□ 12.1
LARP4Q71RC2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.17■■□□□ 1.38e-7■■□□□ 12.1
LARP4Q71RC2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.728e-7■■□□□ 12.1
LARP4Q71RC2 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC10.35□□□□□ -0.755e-7■■□□□ 12.1
LARP4Q71RC2 NUP214-204ENST00000453861 3208 ntTSL 510.05□□□□□ -0.85e-7■■□□□ 12.1
LARP4Q71RC2 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.135e-7■■□□□ 12.1
Retrieved 100 of 15,922 protein–RNA pairs in 164.3 ms