RNA–Protein interactions for RNA: ENST00000483137.1

HNRNPA3-205, Transcript of heterogeneous nuclear ribonucleoprotein A3, humanhuman

TSL 2

Gene HNRNPA3, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA3-205ENST00000483137 AEBP2Q6ZN18 517 aaPredicted RBP27.62■■■□□ 2.01
HNRNPA3-205ENST00000483137 CHIC1Q5VXU3 224 aa26.28■■□□□ 1.8
HNRNPA3-205ENST00000483137 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
HNRNPA3-205ENST00000483137 PHF23Q9BUL5 403 aaPredicted RBP23.29■■□□□ 1.32
HNRNPA3-205ENST00000483137 FOXD1Q16676 465 aa21.95■■□□□ 1.1
HNRNPA3-205ENST00000483137 NISCHQ9Y2I1 1504 aa21.43■■□□□ 1.02
HNRNPA3-205ENST00000483137 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
HNRNPA3-205ENST00000483137 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.89
HNRNPA3-205ENST00000483137 PIAS4Q8N2W9 510 aaPredicted RBP20.57■□□□□ 0.88
HNRNPA3-205ENST00000483137 ADRA2BP18089 450 aa20.55■□□□□ 0.88
HNRNPA3-205ENST00000483137 MSH5O43196 834 aa20.53■□□□□ 0.88
HNRNPA3-205ENST00000483137 POTEDQ86YR6 584 aa19.94■□□□□ 0.78
HNRNPA3-205ENST00000483137 ABCC9O60706 1549 aa19.78■□□□□ 0.76
HNRNPA3-205ENST00000483137 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
HNRNPA3-205ENST00000483137 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
HNRNPA3-205ENST00000483137 MAPK8IP2Q13387 824 aaPredicted RBP18.87■□□□□ 0.61
HNRNPA3-205ENST00000483137 SCAF1Q9H7N4 1312 aaKnown RBP18.8■□□□□ 0.6
HNRNPA3-205ENST00000483137 DMRT2Q9Y5R5 561 aa18.68■□□□□ 0.58
HNRNPA3-205ENST00000483137 RB1CC1Q8TDY2 1594 aa18.56■□□□□ 0.56
HNRNPA3-205ENST00000483137 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
HNRNPA3-205ENST00000483137 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
HNRNPA3-205ENST00000483137 PABPN1Q86U42 306 aaKnown RBP eCLIP18.44■□□□□ 0.54
HNRNPA3-205ENST00000483137 NACADO15069 1562 aa18.33■□□□□ 0.52
HNRNPA3-205ENST00000483137 UNC13AQ9UPW8 1703 aa18.26■□□□□ 0.51
HNRNPA3-205ENST00000483137 CNKSR2Q8WXI2 1034 aa18.1■□□□□ 0.49
HNRNPA3-205ENST00000483137 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.49
HNRNPA3-205ENST00000483137 DCAF8L1A6NGE4 600 aa18.06■□□□□ 0.48
HNRNPA3-205ENST00000483137 HOXD11P31277 338 aaPredicted RBP17.99■□□□□ 0.47
HNRNPA3-205ENST00000483137 RNF216Q9NWF9 866 aaPredicted RBP17.9■□□□□ 0.46
HNRNPA3-205ENST00000483137 MYO15BQ96JP2 1530 aa17.86■□□□□ 0.45
HNRNPA3-205ENST00000483137 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
HNRNPA3-205ENST00000483137 NCBP3Q53F19 620 aaKnown RBP17.8■□□□□ 0.44
HNRNPA3-205ENST00000483137 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
HNRNPA3-205ENST00000483137 SCRIBQ14160 1630 aa17.73■□□□□ 0.43
HNRNPA3-205ENST00000483137 ZCCHC6Q5VYS8 1495 aaKnown RBP17.66■□□□□ 0.42
HNRNPA3-205ENST00000483137 CACNB1Q02641 598 aaPredicted RBP17.65■□□□□ 0.42
HNRNPA3-205ENST00000483137 EIF4G1Q04637 1599 aaKnown RBP17.65■□□□□ 0.42
HNRNPA3-205ENST00000483137 SHROOM4Q9ULL8 1493 aa17.59■□□□□ 0.41
HNRNPA3-205ENST00000483137 DCAF1Q9Y4B6 1507 aa17.56■□□□□ 0.4
HNRNPA3-205ENST00000483137 NPM3O75607 178 aaKnown RBP17.51■□□□□ 0.39
HNRNPA3-205ENST00000483137 RNF39Q9H2S5 420 aa17.5■□□□□ 0.39
HNRNPA3-205ENST00000483137 DNAJC5Q9H3Z4 198 aa17.45■□□□□ 0.38
HNRNPA3-205ENST00000483137 C1QBPQ07021 282 aaKnown RBP17.26■□□□□ 0.35
HNRNPA3-205ENST00000483137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.35
HNRNPA3-205ENST00000483137 KCNA4P22459 653 aa17.25■□□□□ 0.35
HNRNPA3-205ENST00000483137 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
HNRNPA3-205ENST00000483137 CUX2O14529 1486 aa17.01■□□□□ 0.31
HNRNPA3-205ENST00000483137 NCAPD3P42695 1498 aa16.93■□□□□ 0.3
HNRNPA3-205ENST00000483137 NESP48681 1621 aa16.92■□□□□ 0.3
HNRNPA3-205ENST00000483137 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
HNRNPA3-205ENST00000483137 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
HNRNPA3-205ENST00000483137 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
HNRNPA3-205ENST00000483137 SMARCA2P51531 1590 aa16.77■□□□□ 0.28
HNRNPA3-205ENST00000483137 HMGXB3Q12766 1538 aa16.75■□□□□ 0.27
HNRNPA3-205ENST00000483137 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
HNRNPA3-205ENST00000483137 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
HNRNPA3-205ENST00000483137 THOC2Q8NI27 1593 aaKnown RBP16.71■□□□□ 0.27
HNRNPA3-205ENST00000483137 SLC4A2P04920 1241 aa16.69■□□□□ 0.26
HNRNPA3-205ENST00000483137 KIF21AQ7Z4S6 1674 aa16.67■□□□□ 0.26
HNRNPA3-205ENST00000483137 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
HNRNPA3-205ENST00000483137 CAPN15O75808 1086 aa16.62■□□□□ 0.25
HNRNPA3-205ENST00000483137 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
HNRNPA3-205ENST00000483137 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
HNRNPA3-205ENST00000483137 MROH2BQ7Z745 1585 aa16.58■□□□□ 0.24
HNRNPA3-205ENST00000483137 PEG3Q9GZU2 1588 aa16.53■□□□□ 0.24
HNRNPA3-205ENST00000483137 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
HNRNPA3-205ENST00000483137 CADPSQ9ULU8 1353 aa16.44■□□□□ 0.22
HNRNPA3-205ENST00000483137 MRC2Q9UBG0 1479 aa16.43■□□□□ 0.22
HNRNPA3-205ENST00000483137 DSG3P32926 999 aa16.43■□□□□ 0.22
HNRNPA3-205ENST00000483137 WIZO95785 1651 aa16.41■□□□□ 0.22
HNRNPA3-205ENST00000483137 APLP2Q06481 763 aa16.4■□□□□ 0.22
HNRNPA3-205ENST00000483137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.39■□□□□ 0.21
HNRNPA3-205ENST00000483137 HNRNPUL2Q1KMD3 747 aaKnown RBP16.39■□□□□ 0.21
HNRNPA3-205ENST00000483137 TRHP20396 242 aaPredicted RBP16.38■□□□□ 0.21
HNRNPA3-205ENST00000483137 WDR62O43379 1518 aa16.37■□□□□ 0.21
HNRNPA3-205ENST00000483137 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
HNRNPA3-205ENST00000483137 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
HNRNPA3-205ENST00000483137 SAMD1Q6SPF0 538 aaPredicted RBP16.3■□□□□ 0.2
HNRNPA3-205ENST00000483137 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
HNRNPA3-205ENST00000483137 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
HNRNPA3-205ENST00000483137 ZNF219Q9P2Y4 722 aaPredicted RBP16.28■□□□□ 0.2
HNRNPA3-205ENST00000483137 ABCB7O75027 752 aa16.24■□□□□ 0.19
HNRNPA3-205ENST00000483137 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
HNRNPA3-205ENST00000483137 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
HNRNPA3-205ENST00000483137 CFTRP13569 1480 aa16.16■□□□□ 0.18
HNRNPA3-205ENST00000483137 RIMBP3CA6NJZ7 1639 aa16.13■□□□□ 0.17
HNRNPA3-205ENST00000483137 RIMBP3BA6NNM3 1639 aa16.13■□□□□ 0.17
HNRNPA3-205ENST00000483137 RIMBP3Q9UFD9 1639 aa16.13■□□□□ 0.17
HNRNPA3-205ENST00000483137 RSF1Q96T23 1441 aaPredicted RBP16.09■□□□□ 0.17
HNRNPA3-205ENST00000483137 ZNF608Q9ULD9 1512 aaPredicted RBP16.08■□□□□ 0.16
HNRNPA3-205ENST00000483137 TOP2AP11388 1531 aaKnown RBP16.07■□□□□ 0.16
HNRNPA3-205ENST00000483137 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
HNRNPA3-205ENST00000483137 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
HNRNPA3-205ENST00000483137 CYB5RLQ6IPT4 315 aa16.01■□□□□ 0.15
HNRNPA3-205ENST00000483137 PRDM2Q13029 1718 aa16.01■□□□□ 0.15
HNRNPA3-205ENST00000483137 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
HNRNPA3-205ENST00000483137 CCDC88BA6NC98 1476 aa15.95■□□□□ 0.14
HNRNPA3-205ENST00000483137 FBLN2P98095 1184 aa15.94■□□□□ 0.14
HNRNPA3-205ENST00000483137 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
HNRNPA3-205ENST00000483137 CHD1O14646 1710 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms