Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 AC105339.3-201ENST00000560043 636 ntBASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 AC025062.2-201ENST00000605477 670 ntBASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCRAQ6ISU1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTCRAQ6ISU1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 ABCD1P5-201ENST00000445663 754 ntBASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 AC007375.3-201ENST00000600936 2314 ntBASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.04■□□□□ 0.64
PTCRAQ6ISU1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 AL035633.1-201ENST00000406139 838 ntBASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.03■□□□□ 0.64
PTCRAQ6ISU1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms