Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
MMP13P45452 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.3■□□□□ 0.68
MMP13P45452 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.3■□□□□ 0.68
MMP13P45452 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.3■□□□□ 0.68
MMP13P45452 AC083906.6-201ENST00000641366 219 ntBASIC19.3■□□□□ 0.68
MMP13P45452 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.3■□□□□ 0.68
MMP13P45452 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.3■□□□□ 0.68
MMP13P45452 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
MMP13P45452 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.3■□□□□ 0.68
MMP13P45452 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MMP13P45452 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP13P45452 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.29■□□□□ 0.68
MMP13P45452 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.29■□□□□ 0.68
MMP13P45452 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP13P45452 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.29■□□□□ 0.68
MMP13P45452 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP13P45452 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP13P45452 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP13P45452 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP13P45452 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
MMP13P45452 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MMP13P45452 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.29■□□□□ 0.68
MMP13P45452 FITM1-202ENST00000559294 800 ntBASIC19.29■□□□□ 0.68
MMP13P45452 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP13P45452 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MMP13P45452 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MMP13P45452 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP13P45452 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MMP13P45452 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.29■□□□□ 0.68
MMP13P45452 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.28■□□□□ 0.68
MMP13P45452 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.28■□□□□ 0.68
MMP13P45452 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
MMP13P45452 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MMP13P45452 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MMP13P45452 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.28■□□□□ 0.68
MMP13P45452 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.28■□□□□ 0.68
MMP13P45452 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
MMP13P45452 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.28■□□□□ 0.68
MMP13P45452 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.28■□□□□ 0.68
MMP13P45452 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.28■□□□□ 0.68
MMP13P45452 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
MMP13P45452 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP13P45452 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
MMP13P45452 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP13P45452 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP13P45452 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MMP13P45452 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP13P45452 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.27■□□□□ 0.68
MMP13P45452 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.27■□□□□ 0.68
MMP13P45452 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
MMP13P45452 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP13P45452 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
MMP13P45452 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP13P45452 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP13P45452 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP13P45452 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP13P45452 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MMP13P45452 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP13P45452 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP13P45452 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
MMP13P45452 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP13P45452 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.27■□□□□ 0.68
MMP13P45452 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.27■□□□□ 0.68
MMP13P45452 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MMP13P45452 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
MMP13P45452 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MMP13P45452 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP13P45452 AC073592.3-201ENST00000625118 1834 ntBASIC19.27■□□□□ 0.68
MMP13P45452 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.27■□□□□ 0.67
MMP13P45452 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.27■□□□□ 0.67
MMP13P45452 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.27■□□□□ 0.67
MMP13P45452 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
MMP13P45452 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MMP13P45452 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.27■□□□□ 0.67
MMP13P45452 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
MMP13P45452 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms