Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.16■□□□□ 0.34
LCN1P31025 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.16■□□□□ 0.34
LCN1P31025 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 KRT8P9-201ENST00000558927 1449 ntBASIC17.16■□□□□ 0.34
LCN1P31025 HOXB1-202ENST00000577092 1414 ntBASIC17.16■□□□□ 0.34
LCN1P31025 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.16■□□□□ 0.34
LCN1P31025 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.16■□□□□ 0.34
LCN1P31025 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.16■□□□□ 0.34
LCN1P31025 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.16■□□□□ 0.34
LCN1P31025 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.16■□□□□ 0.34
LCN1P31025 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
LCN1P31025 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.16■□□□□ 0.34
LCN1P31025 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LCN1P31025 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.16■□□□□ 0.34
LCN1P31025 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LCN1P31025 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
LCN1P31025 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
LCN1P31025 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LCN1P31025 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.15■□□□□ 0.34
LCN1P31025 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LCN1P31025 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.15■□□□□ 0.34
LCN1P31025 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.15■□□□□ 0.34
LCN1P31025 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.15■□□□□ 0.34
LCN1P31025 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.15■□□□□ 0.34
LCN1P31025 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LCN1P31025 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
LCN1P31025 CR769767.2-201ENST00000622735 460 ntBASIC17.15■□□□□ 0.34
LCN1P31025 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.15■□□□□ 0.34
LCN1P31025 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.15■□□□□ 0.34
LCN1P31025 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LCN1P31025 LINC01568-207ENST00000641790 1380 ntBASIC17.15■□□□□ 0.34
LCN1P31025 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.15■□□□□ 0.34
LCN1P31025 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LCN1P31025 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCN1P31025 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCN1P31025 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCN1P31025 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.14■□□□□ 0.33
LCN1P31025 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCN1P31025 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCN1P31025 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LCN1P31025 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
LCN1P31025 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
LCN1P31025 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCN1P31025 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.14■□□□□ 0.33
LCN1P31025 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
LCN1P31025 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LCN1P31025 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LCN1P31025 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCN1P31025 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
LCN1P31025 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.14■□□□□ 0.33
LCN1P31025 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.14■□□□□ 0.33
LCN1P31025 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.14■□□□□ 0.33
LCN1P31025 AC145285.6-201ENST00000604632 637 ntBASIC17.14■□□□□ 0.33
LCN1P31025 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
LCN1P31025 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LCN1P31025 AC073912.3-201ENST00000624414 853 ntBASIC17.14■□□□□ 0.33
LCN1P31025 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LCN1P31025 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LCN1P31025 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LCN1P31025 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.14■□□□□ 0.33
LCN1P31025 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCN1P31025 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LCN1P31025 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCN1P31025 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LCN1P31025 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.14■□□□□ 0.33
LCN1P31025 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LCN1P31025 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LCN1P31025 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LCN1P31025 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms