Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGN1P05114 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HMGN1P05114 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGN1P05114 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGN1P05114 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HMGN1P05114 AL445675.2-201ENST00000620291 557 ntBASIC16.83■□□□□ 0.28
HMGN1P05114 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGN1P05114 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGN1P05114 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HMGN1P05114 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGN1P05114 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGN1P05114 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGN1P05114 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HMGN1P05114 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGN1P05114 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGN1P05114 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGN1P05114 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGN1P05114 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HMGN1P05114 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGN1P05114 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGN1P05114 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
HMGN1P05114 AC142086.2-201ENST00000569753 217 ntBASIC16.82■□□□□ 0.28
HMGN1P05114 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGN1P05114 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
HMGN1P05114 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGN1P05114 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HMGN1P05114 AC067852.2-201ENST00000590513 2313 ntBASIC16.82■□□□□ 0.28
HMGN1P05114 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HMGN1P05114 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGN1P05114 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HMGN1P05114 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HMGN1P05114 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HMGN1P05114 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGN1P05114 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGN1P05114 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGN1P05114 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HMGN1P05114 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HMGN1P05114 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HMGN1P05114 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGN1P05114 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.81■□□□□ 0.28
HMGN1P05114 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGN1P05114 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGN1P05114 AC008403.3-201ENST00000598924 454 ntBASIC16.81■□□□□ 0.28
HMGN1P05114 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGN1P05114 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
HMGN1P05114 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
HMGN1P05114 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 AC093677.2-201ENST00000600169 1863 ntBASIC16.81■□□□□ 0.28
HMGN1P05114 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGN1P05114 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGN1P05114 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGN1P05114 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HMGN1P05114 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGN1P05114 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGN1P05114 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGN1P05114 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGN1P05114 GNAS-203ENST00000306120 1878 ntBASIC16.8■□□□□ 0.28
HMGN1P05114 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HMGN1P05114 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGN1P05114 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGN1P05114 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGN1P05114 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGN1P05114 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGN1P05114 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGN1P05114 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGN1P05114 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGN1P05114 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms