Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 AC079602.3-201ENST00000623931 403 ntBASIC18.38■□□□□ 0.53
PCDHGA12O60330 AC112497.1-201ENST00000624824 639 ntBASIC18.38■□□□□ 0.53
PCDHGA12O60330 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDHGA12O60330 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA12O60330 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 UNC93B7-201ENST00000509439 705 ntBASIC18.37■□□□□ 0.53
PCDHGA12O60330 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 AL136038.4-201ENST00000603606 1261 ntBASIC18.37■□□□□ 0.53
PCDHGA12O60330 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 KRT8P10-201ENST00000450021 1447 ntBASIC18.37■□□□□ 0.53
PCDHGA12O60330 KRT8P3-201ENST00000519669 1449 ntBASIC18.37■□□□□ 0.53
PCDHGA12O60330 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA12O60330 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA12O60330 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA12O60330 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA12O60330 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA12O60330 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA12O60330 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA12O60330 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.36■□□□□ 0.53
PCDHGA12O60330 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA12O60330 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA12O60330 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA12O60330 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA12O60330 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 MIR3917-201ENST00000580971 93 ntBASIC18.36■□□□□ 0.53
PCDHGA12O60330 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA12O60330 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA12O60330 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDHGA12O60330 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA12O60330 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PCDHGA12O60330 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 AC093503.3-201ENST00000624917 2352 ntBASIC18.35■□□□□ 0.53
PCDHGA12O60330 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 SDHAP1-207ENST00000440850 2000 ntBASIC18.35■□□□□ 0.53
PCDHGA12O60330 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA12O60330 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA12O60330 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA12O60330 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA12O60330 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms