Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.22■□□□□ 0.51
CDC7O00311 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 ABALON-201ENST00000629058 1903 ntBASIC18.22■□□□□ 0.51
CDC7O00311 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.22■□□□□ 0.51
CDC7O00311 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDC7O00311 KRT18P41-201ENST00000518924 1277 ntBASIC18.22■□□□□ 0.51
CDC7O00311 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CDC7O00311 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.22■□□□□ 0.51
CDC7O00311 AP006294.2-201ENST00000641667 209 ntBASIC18.22■□□□□ 0.51
CDC7O00311 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.22■□□□□ 0.51
CDC7O00311 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.22■□□□□ 0.51
CDC7O00311 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDC7O00311 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDC7O00311 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.21■□□□□ 0.51
CDC7O00311 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDC7O00311 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CDC7O00311 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CDC7O00311 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CDC7O00311 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.21■□□□□ 0.51
CDC7O00311 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.21■□□□□ 0.51
CDC7O00311 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.21■□□□□ 0.51
CDC7O00311 AL355075.4-201ENST00000554988 638 ntBASIC18.21■□□□□ 0.51
CDC7O00311 AL023803.3-201ENST00000615559 522 ntBASIC18.21■□□□□ 0.51
CDC7O00311 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.21■□□□□ 0.51
CDC7O00311 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.21■□□□□ 0.51
CDC7O00311 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 AC099343.3-201ENST00000605834 2503 ntBASIC18.21■□□□□ 0.51
CDC7O00311 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.21■□□□□ 0.51
CDC7O00311 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.21■□□□□ 0.51
CDC7O00311 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDC7O00311 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.21■□□□□ 0.51
CDC7O00311 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDC7O00311 AC135776.1-201ENST00000319817 2481 ntBASIC18.21■□□□□ 0.5
CDC7O00311 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.21■□□□□ 0.5
CDC7O00311 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CDC7O00311 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.2■□□□□ 0.5
CDC7O00311 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.2■□□□□ 0.5
CDC7O00311 MIR1238-201ENST00000408483 83 ntBASIC18.2■□□□□ 0.5
CDC7O00311 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.2■□□□□ 0.5
CDC7O00311 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.2■□□□□ 0.5
CDC7O00311 TSPY15P-201ENST00000457163 923 ntBASIC18.2■□□□□ 0.5
CDC7O00311 AP003041.3-201ENST00000527151 707 ntBASIC18.2■□□□□ 0.5
CDC7O00311 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDC7O00311 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.2■□□□□ 0.5
CDC7O00311 FITM1-202ENST00000559294 800 ntBASIC18.2■□□□□ 0.5
CDC7O00311 MIR3180-5-201ENST00000583743 153 ntBASIC18.2■□□□□ 0.5
CDC7O00311 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.2■□□□□ 0.5
CDC7O00311 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDC7O00311 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 AC036111.1-201ENST00000533973 1582 ntBASIC18.2■□□□□ 0.5
CDC7O00311 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDC7O00311 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC7O00311 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.19■□□□□ 0.5
CDC7O00311 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDC7O00311 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms