Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 AC034232.1-201ENST00000506026 1064 ntBASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 KRT18P56-201ENST00000507275 550 ntBASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 AL136038.3-201ENST00000561909 1096 ntBASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 AC116407.4-201ENST00000623319 1061 ntBASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA3F8WFD2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NPIPA3F8WFD2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 HYMAI.1-201ENST00000620949 238 ntBASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 AP000974.1-201ENST00000623909 2387 ntBASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 BX323043.1-201ENST00000641006 1765 ntBASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA3F8WFD2 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 RASA4DP-201ENST00000460726 1199 ntBASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA3F8WFD2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms