Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 TNRC18P3-201ENST00000441896 2691 ntBASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 AL499627.1-201ENST00000569373 2188 ntBASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 AL645608.8-201ENST00000606034 2086 ntBASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC133681.1-201ENST00000465482 601 ntBASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV6-7A0A0A0MS04 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 NIFKP9-201ENST00000419265 221 ntBASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 HLA-L-209ENST00000420110 1011 ntBASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC004980.1-204ENST00000429707 299 ntBASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRBV6-7A0A0A0MS04 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms