Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 AC106886.4-201ENST00000623557 2502 ntBASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 AC093010.1-201ENST00000473625 1624 ntBASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
LINC01558Q9Y6Z2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 AC132872.4-202ENST00000622924 2756 ntBASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 AP001271.2-201ENST00000624018 1556 ntBASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 AL365209.1-201ENST00000624418 6473 ntBASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
LINC01558Q9Y6Z2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 AC126755.1-201ENST00000525846 6405 ntBASIC9.61□□□□□ -0.87
LINC01558Q9Y6Z2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms