Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTN3Q9P232 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTN3Q9P232 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTN3Q9P232 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTN3Q9P232 MIR662-201ENST00000384847 95 ntBASIC19.98■□□□□ 0.79
CNTN3Q9P232 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTN3Q9P232 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTN3Q9P232 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTN3Q9P232 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CNTN3Q9P232 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTN3Q9P232 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTN3Q9P232 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTN3Q9P232 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTN3Q9P232 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CNTN3Q9P232 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CNTN3Q9P232 AL163051.1-201ENST00000569214 1512 ntBASIC19.97■□□□□ 0.79
CNTN3Q9P232 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.97■□□□□ 0.79
CNTN3Q9P232 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.97■□□□□ 0.79
CNTN3Q9P232 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.97■□□□□ 0.79
CNTN3Q9P232 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.97■□□□□ 0.79
CNTN3Q9P232 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.97■□□□□ 0.79
CNTN3Q9P232 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.97■□□□□ 0.79
CNTN3Q9P232 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTN3Q9P232 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNTN3Q9P232 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.97■□□□□ 0.79
CNTN3Q9P232 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.97■□□□□ 0.79
CNTN3Q9P232 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNTN3Q9P232 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTN3Q9P232 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTN3Q9P232 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTN3Q9P232 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNTN3Q9P232 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNTN3Q9P232 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTN3Q9P232 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.96■□□□□ 0.79
CNTN3Q9P232 AL162741.1-201ENST00000565563 1558 ntBASIC19.96■□□□□ 0.79
CNTN3Q9P232 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTN3Q9P232 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTN3Q9P232 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTN3Q9P232 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CNTN3Q9P232 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNTN3Q9P232 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.96■□□□□ 0.79
CNTN3Q9P232 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.96■□□□□ 0.79
CNTN3Q9P232 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTN3Q9P232 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTN3Q9P232 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTN3Q9P232 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNTN3Q9P232 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.96■□□□□ 0.79
CNTN3Q9P232 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNTN3Q9P232 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.96■□□□□ 0.79
CNTN3Q9P232 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNTN3Q9P232 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CNTN3Q9P232 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.96■□□□□ 0.79
CNTN3Q9P232 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNTN3Q9P232 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTN3Q9P232 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTN3Q9P232 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNTN3Q9P232 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNTN3Q9P232 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTN3Q9P232 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTN3Q9P232 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNTN3Q9P232 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNTN3Q9P232 AC093525.10-201ENST00000625130 1569 ntBASIC19.95■□□□□ 0.78
CNTN3Q9P232 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CNTN3Q9P232 AC004408.2-201ENST00000623613 2777 ntBASIC19.95■□□□□ 0.78
CNTN3Q9P232 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CNTN3Q9P232 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTN3Q9P232 AC112777.1-201ENST00000540175 1423 ntBASIC19.94■□□□□ 0.78
CNTN3Q9P232 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTN3Q9P232 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTN3Q9P232 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTN3Q9P232 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CNTN3Q9P232 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNTN3Q9P232 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.94■□□□□ 0.78
CNTN3Q9P232 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms