Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 YBX1P10-201ENST00000444752 975 ntBASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 AC005829.2-201ENST00000571422 1056 ntBASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 AC087623.3-201ENST00000607047 1098 ntBASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 MIR6821-201ENST00000617625 74 ntBASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SND1-IT1Q9HBX3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.46□□□□□ -0.42
SND1-IT1Q9HBX3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
SND1-IT1Q9HBX3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SND1-IT1Q9HBX3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SND1-IT1Q9HBX3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
SND1-IT1Q9HBX3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SND1-IT1Q9HBX3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SND1-IT1Q9HBX3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
SND1-IT1Q9HBX3 SIRPAP1-201ENST00000448467 1770 ntBASIC12.46□□□□□ -0.42
SND1-IT1Q9HBX3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.46□□□□□ -0.42
SND1-IT1Q9HBX3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 SERPINH1P1-201ENST00000419794 1249 ntBASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SND1-IT1Q9HBX3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 AC124283.5-201ENST00000624661 1809 ntBASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms