Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRTM1Q9HBL6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 AC026471.1-201ENST00000564629 3026 ntBASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 NOC2LP2-201ENST00000407594 1944 ntBASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 AL109659.2-201ENST00000606809 1674 ntBASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 MESTP1-201ENST00000404287 994 ntBASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 AL135905.2-201ENST00000584934 1404 ntBASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.88■□□□□ 0.45
LRTM1Q9HBL6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 ITM2C-210ENST00000620962 501 ntBASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRTM1Q9HBL6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 AC008556.1-201ENST00000610908 2040 ntBASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRTM1Q9HBL6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms