Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.86■□□□□ 0.61
PHACTR1Q9C0D0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PHACTR1Q9C0D0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHACTR1Q9C0D0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PHACTR1Q9C0D0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHACTR1Q9C0D0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
PHACTR1Q9C0D0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
PHACTR1Q9C0D0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHACTR1Q9C0D0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHACTR1Q9C0D0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHACTR1Q9C0D0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHACTR1Q9C0D0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PHACTR1Q9C0D0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHACTR1Q9C0D0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHACTR1Q9C0D0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 AL353807.1-201ENST00000427475 662 ntBASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHACTR1Q9C0D0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.83■□□□□ 0.61
PHACTR1Q9C0D0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.83■□□□□ 0.61
PHACTR1Q9C0D0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PHACTR1Q9C0D0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PHACTR1Q9C0D0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PHACTR1Q9C0D0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PHACTR1Q9C0D0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PHACTR1Q9C0D0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PHACTR1Q9C0D0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 RNA5SP413-201ENST00000516373 109 ntBASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 LINC00896-202ENST00000609602 2128 ntBASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHACTR1Q9C0D0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.82■□□□□ 0.6
PHACTR1Q9C0D0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms