Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VPS33AQ96AX1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 MTDHP1-201ENST00000605323 784 ntBASIC17.87■□□□□ 0.45
VPS33AQ96AX1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VPS33AQ96AX1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 AC233263.1-201ENST00000578059 224 ntBASIC17.86■□□□□ 0.45
VPS33AQ96AX1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 KRT8P32-201ENST00000512863 1461 ntBASIC17.86■□□□□ 0.45
VPS33AQ96AX1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
VPS33AQ96AX1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 AC069544.1-201ENST00000609399 999 ntBASIC17.85■□□□□ 0.45
VPS33AQ96AX1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 AL357033.4-201ENST00000617703 1807 ntBASIC17.85■□□□□ 0.45
VPS33AQ96AX1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS33AQ96AX1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms