Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC4Q92889 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.09■□□□□ 0.97
ERCC4Q92889 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.09■□□□□ 0.97
ERCC4Q92889 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC4Q92889 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ERCC4Q92889 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ERCC4Q92889 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC4Q92889 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ERCC4Q92889 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ERCC4Q92889 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
ERCC4Q92889 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.08■□□□□ 0.97
ERCC4Q92889 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ERCC4Q92889 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ERCC4Q92889 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
ERCC4Q92889 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ERCC4Q92889 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ERCC4Q92889 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ERCC4Q92889 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ERCC4Q92889 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.08■□□□□ 0.97
ERCC4Q92889 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.08■□□□□ 0.97
ERCC4Q92889 AC008040.2-201ENST00000461049 708 ntBASIC21.08■□□□□ 0.97
ERCC4Q92889 AC091390.4-202ENST00000476426 537 ntBASIC21.08■□□□□ 0.97
ERCC4Q92889 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
ERCC4Q92889 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ERCC4Q92889 MIR4651-201ENST00000582622 73 ntBASIC21.08■□□□□ 0.97
ERCC4Q92889 AC006058.3-201ENST00000606217 1069 ntBASIC21.08■□□□□ 0.97
ERCC4Q92889 AL445675.2-201ENST00000620291 557 ntBASIC21.08■□□□□ 0.97
ERCC4Q92889 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ERCC4Q92889 AL357033.4-201ENST00000617703 1807 ntBASIC21.08■□□□□ 0.96
ERCC4Q92889 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
ERCC4Q92889 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ERCC4Q92889 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ERCC4Q92889 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC4Q92889 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC4Q92889 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.07■□□□□ 0.96
ERCC4Q92889 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC4Q92889 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ERCC4Q92889 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.07■□□□□ 0.96
ERCC4Q92889 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
ERCC4Q92889 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.07■□□□□ 0.96
ERCC4Q92889 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.07■□□□□ 0.96
ERCC4Q92889 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.07■□□□□ 0.96
ERCC4Q92889 AC110285.5-201ENST00000611501 352 ntBASIC21.07■□□□□ 0.96
ERCC4Q92889 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.07■□□□□ 0.96
ERCC4Q92889 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC4Q92889 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.07■□□□□ 0.96
ERCC4Q92889 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC4Q92889 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC4Q92889 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ERCC4Q92889 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.07■□□□□ 0.96
ERCC4Q92889 KRT8P32-201ENST00000512863 1461 ntBASIC21.07■□□□□ 0.96
ERCC4Q92889 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC4Q92889 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
ERCC4Q92889 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.06■□□□□ 0.96
ERCC4Q92889 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.06■□□□□ 0.96
ERCC4Q92889 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.06■□□□□ 0.96
ERCC4Q92889 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC4Q92889 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.06■□□□□ 0.96
ERCC4Q92889 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC4Q92889 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.06■□□□□ 0.96
ERCC4Q92889 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC4Q92889 NIFKP9-201ENST00000419265 221 ntBASIC21.06■□□□□ 0.96
ERCC4Q92889 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC4Q92889 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.06■□□□□ 0.96
ERCC4Q92889 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.06■□□□□ 0.96
ERCC4Q92889 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.06■□□□□ 0.96
ERCC4Q92889 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC4Q92889 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ERCC4Q92889 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
ERCC4Q92889 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ERCC4Q92889 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.06■□□□□ 0.96
ERCC4Q92889 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.06■□□□□ 0.96
ERCC4Q92889 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.06■□□□□ 0.96
ERCC4Q92889 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ERCC4Q92889 HTR7P1-201ENST00000538670 1336 ntBASIC21.05■□□□□ 0.96
ERCC4Q92889 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC4Q92889 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.05■□□□□ 0.96
ERCC4Q92889 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.05■□□□□ 0.96
ERCC4Q92889 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
ERCC4Q92889 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC4Q92889 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC4Q92889 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ERCC4Q92889 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC4Q92889 AC133681.1-201ENST00000465482 601 ntBASIC21.05■□□□□ 0.96
ERCC4Q92889 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC4Q92889 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.05■□□□□ 0.96
ERCC4Q92889 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ERCC4Q92889 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ERCC4Q92889 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC4Q92889 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC4Q92889 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC4Q92889 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC4Q92889 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.05■□□□□ 0.96
ERCC4Q92889 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ERCC4Q92889 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC4Q92889 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC4Q92889 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC4Q92889 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ERCC4Q92889 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.04■□□□□ 0.96
ERCC4Q92889 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms