Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 UNC93B2-201ENST00000285383 730 ntBASIC17.14■□□□□ 0.33
CNOT9Q92600 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.14■□□□□ 0.33
CNOT9Q92600 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.14■□□□□ 0.33
CNOT9Q92600 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.14■□□□□ 0.33
CNOT9Q92600 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.14■□□□□ 0.33
CNOT9Q92600 AP005242.2-201ENST00000580065 1175 ntBASIC17.14■□□□□ 0.33
CNOT9Q92600 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 AP000525.1-201ENST00000608286 694 ntBASIC17.14■□□□□ 0.33
CNOT9Q92600 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.14■□□□□ 0.33
CNOT9Q92600 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.14■□□□□ 0.33
CNOT9Q92600 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CNOT9Q92600 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CNOT9Q92600 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.14■□□□□ 0.33
CNOT9Q92600 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNOT9Q92600 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT9Q92600 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CNOT9Q92600 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.13■□□□□ 0.33
CNOT9Q92600 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CNOT9Q92600 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CNOT9Q92600 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT9Q92600 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CNOT9Q92600 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT9Q92600 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.13■□□□□ 0.33
CNOT9Q92600 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT9Q92600 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT9Q92600 AC073592.3-201ENST00000625118 1834 ntBASIC17.13■□□□□ 0.33
CNOT9Q92600 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT9Q92600 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT9Q92600 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CNOT9Q92600 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CNOT9Q92600 CA15P1-201ENST00000481698 905 ntBASIC17.13■□□□□ 0.33
CNOT9Q92600 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CNOT9Q92600 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CNOT9Q92600 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.13■□□□□ 0.33
CNOT9Q92600 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.13■□□□□ 0.33
CNOT9Q92600 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.13■□□□□ 0.33
CNOT9Q92600 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
CNOT9Q92600 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT9Q92600 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CNOT9Q92600 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT9Q92600 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.13■□□□□ 0.33
CNOT9Q92600 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.13■□□□□ 0.33
CNOT9Q92600 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT9Q92600 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.13■□□□□ 0.33
CNOT9Q92600 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CNOT9Q92600 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.13■□□□□ 0.33
CNOT9Q92600 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.12■□□□□ 0.33
CNOT9Q92600 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.12■□□□□ 0.33
CNOT9Q92600 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CNOT9Q92600 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.12■□□□□ 0.33
CNOT9Q92600 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.12■□□□□ 0.33
CNOT9Q92600 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CNOT9Q92600 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.12■□□□□ 0.33
CNOT9Q92600 AL390955.1-201ENST00000428694 934 ntBASIC17.12■□□□□ 0.33
CNOT9Q92600 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CNOT9Q92600 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.12■□□□□ 0.33
CNOT9Q92600 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.12■□□□□ 0.33
CNOT9Q92600 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.12■□□□□ 0.33
CNOT9Q92600 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CNOT9Q92600 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.12■□□□□ 0.33
CNOT9Q92600 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.12■□□□□ 0.33
CNOT9Q92600 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.12■□□□□ 0.33
CNOT9Q92600 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNOT9Q92600 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.11■□□□□ 0.33
CNOT9Q92600 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CNOT9Q92600 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.11■□□□□ 0.33
CNOT9Q92600 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms