Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD3Q7Z3D4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 AC034236.2-201ENST00000606662 1610 ntBASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 AC007613.1-201ENST00000572811 2597 ntBASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD3Q7Z3D4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LYSMD3Q7Z3D4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LYSMD3Q7Z3D4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
LYSMD3Q7Z3D4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.64■□□□□ 0.58
LYSMD3Q7Z3D4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD3Q7Z3D4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 KRT18P23-201ENST00000435622 1283 ntBASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD3Q7Z3D4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms