Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PACS1Q6VY07 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.79■□□□□ 0.6
PACS1Q6VY07 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 KRT17P2-201ENST00000300992 1314 ntBASIC18.79■□□□□ 0.6
PACS1Q6VY07 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PACS1Q6VY07 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PACS1Q6VY07 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.79■□□□□ 0.6
PACS1Q6VY07 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.79■□□□□ 0.6
PACS1Q6VY07 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.79■□□□□ 0.6
PACS1Q6VY07 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.79■□□□□ 0.6
PACS1Q6VY07 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 AL162741.1-201ENST00000565563 1558 ntBASIC18.79■□□□□ 0.6
PACS1Q6VY07 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.79■□□□□ 0.6
PACS1Q6VY07 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PACS1Q6VY07 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PACS1Q6VY07 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PACS1Q6VY07 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 KRT8P3-201ENST00000519669 1449 ntBASIC18.78■□□□□ 0.6
PACS1Q6VY07 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 RBM17P1-201ENST00000453646 1190 ntBASIC18.78■□□□□ 0.6
PACS1Q6VY07 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 AP005242.2-201ENST00000580065 1175 ntBASIC18.78■□□□□ 0.6
PACS1Q6VY07 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.78■□□□□ 0.6
PACS1Q6VY07 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PACS1Q6VY07 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.77■□□□□ 0.6
PACS1Q6VY07 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.77■□□□□ 0.6
PACS1Q6VY07 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.77■□□□□ 0.6
PACS1Q6VY07 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PACS1Q6VY07 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PACS1Q6VY07 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.77■□□□□ 0.6
PACS1Q6VY07 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PACS1Q6VY07 UNC93B2-201ENST00000285383 730 ntBASIC18.77■□□□□ 0.6
PACS1Q6VY07 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PACS1Q6VY07 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.77■□□□□ 0.6
PACS1Q6VY07 AC097488.1-201ENST00000507834 756 ntBASIC18.77■□□□□ 0.6
PACS1Q6VY07 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PACS1Q6VY07 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PACS1Q6VY07 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.77■□□□□ 0.6
PACS1Q6VY07 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.77■□□□□ 0.6
PACS1Q6VY07 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PACS1Q6VY07 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PACS1Q6VY07 AC020916.1-201ENST00000587762 1774 ntBASIC18.77■□□□□ 0.6
PACS1Q6VY07 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.77■□□□□ 0.6
PACS1Q6VY07 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PACS1Q6VY07 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.77■□□□□ 0.6
PACS1Q6VY07 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PACS1Q6VY07 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.77■□□□□ 0.6
PACS1Q6VY07 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PACS1Q6VY07 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PACS1Q6VY07 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PACS1Q6VY07 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.77■□□□□ 0.59
PACS1Q6VY07 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PACS1Q6VY07 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.76■□□□□ 0.59
PACS1Q6VY07 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.76■□□□□ 0.59
PACS1Q6VY07 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.76■□□□□ 0.59
PACS1Q6VY07 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PACS1Q6VY07 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PACS1Q6VY07 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
PACS1Q6VY07 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PACS1Q6VY07 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PACS1Q6VY07 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PACS1Q6VY07 MFAP1P1-201ENST00000442257 1255 ntBASIC18.76■□□□□ 0.59
PACS1Q6VY07 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.76■□□□□ 0.59
PACS1Q6VY07 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PACS1Q6VY07 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms