Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC12.81□□□□□ -0.36
PCP4P48539 AP000845.1-201ENST00000581677 2131 ntBASIC12.81□□□□□ -0.36
PCP4P48539 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.81□□□□□ -0.36
PCP4P48539 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
PCP4P48539 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.81□□□□□ -0.36
PCP4P48539 AC092117.1-201ENST00000621230 3250 ntBASIC12.81□□□□□ -0.36
PCP4P48539 AC026748.1-201ENST00000624349 3251 ntBASIC12.81□□□□□ -0.36
PCP4P48539 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
PCP4P48539 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC12.81□□□□□ -0.36
PCP4P48539 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 MADD-208ENST00000405573 1823 ntTSL 5 BASIC12.81□□□□□ -0.36
PCP4P48539 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
PCP4P48539 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.81□□□□□ -0.36
PCP4P48539 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PCP4P48539 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PCP4P48539 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PCP4P48539 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC12.8□□□□□ -0.36
PCP4P48539 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
PCP4P48539 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.8□□□□□ -0.36
PCP4P48539 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.8□□□□□ -0.36
PCP4P48539 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
PCP4P48539 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
PCP4P48539 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 AL161772.1-201ENST00000610494 4412 ntBASIC12.8□□□□□ -0.36
PCP4P48539 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.8□□□□□ -0.36
PCP4P48539 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
PCP4P48539 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
PCP4P48539 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.8□□□□□ -0.36
PCP4P48539 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCP4P48539 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
PCP4P48539 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PCP4P48539 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.79□□□□□ -0.36
PCP4P48539 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
PCP4P48539 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
PCP4P48539 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 MOK-225ENST00000522867 1883 ntTSL 5 BASIC12.79□□□□□ -0.36
PCP4P48539 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.79□□□□□ -0.36
PCP4P48539 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
PCP4P48539 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 COL6A4P2-202ENST00000504443 2753 ntBASIC12.79□□□□□ -0.36
PCP4P48539 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms