Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 AL109659.2-201ENST00000606809 1674 ntBASIC19.92■□□□□ 0.78
BRD2P25440 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.92■□□□□ 0.78
BRD2P25440 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
BRD2P25440 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRD2P25440 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRD2P25440 ECEL1P2-202ENST00000465689 757 ntBASIC19.92■□□□□ 0.78
BRD2P25440 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.92■□□□□ 0.78
BRD2P25440 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
BRD2P25440 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BRD2P25440 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.92■□□□□ 0.78
BRD2P25440 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRD2P25440 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
BRD2P25440 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRD2P25440 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.92■□□□□ 0.78
BRD2P25440 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
BRD2P25440 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRD2P25440 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRD2P25440 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRD2P25440 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
BRD2P25440 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 AL499627.1-201ENST00000569373 2188 ntBASIC19.91■□□□□ 0.78
BRD2P25440 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
BRD2P25440 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.91■□□□□ 0.78
BRD2P25440 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.91■□□□□ 0.78
BRD2P25440 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
BRD2P25440 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
BRD2P25440 AL138781.2-201ENST00000617896 1843 ntBASIC19.91■□□□□ 0.78
BRD2P25440 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.91■□□□□ 0.78
BRD2P25440 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.91■□□□□ 0.78
BRD2P25440 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.91■□□□□ 0.78
BRD2P25440 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.91■□□□□ 0.78
BRD2P25440 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.91■□□□□ 0.78
BRD2P25440 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.91■□□□□ 0.78
BRD2P25440 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
BRD2P25440 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.91■□□□□ 0.78
BRD2P25440 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.91■□□□□ 0.78
BRD2P25440 LINC01568-207ENST00000641790 1380 ntBASIC19.91■□□□□ 0.78
BRD2P25440 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.91■□□□□ 0.78
BRD2P25440 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
BRD2P25440 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
BRD2P25440 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 AC036111.1-201ENST00000533973 1582 ntBASIC19.91■□□□□ 0.78
BRD2P25440 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BRD2P25440 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.9■□□□□ 0.78
BRD2P25440 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
BRD2P25440 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.9■□□□□ 0.78
BRD2P25440 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
BRD2P25440 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BRD2P25440 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRD2P25440 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRD2P25440 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BRD2P25440 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRD2P25440 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRD2P25440 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
BRD2P25440 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRD2P25440 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BRD2P25440 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.9■□□□□ 0.78
BRD2P25440 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRD2P25440 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
BRD2P25440 AC073912.3-201ENST00000624414 853 ntBASIC19.9■□□□□ 0.78
BRD2P25440 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BRD2P25440 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.9■□□□□ 0.78
BRD2P25440 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRD2P25440 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRD2P25440 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.9■□□□□ 0.78
BRD2P25440 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRD2P25440 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
BRD2P25440 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.9■□□□□ 0.78
BRD2P25440 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.9■□□□□ 0.78
BRD2P25440 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
BRD2P25440 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
BRD2P25440 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
BRD2P25440 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRD2P25440 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRD2P25440 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
BRD2P25440 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRD2P25440 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.89■□□□□ 0.77
BRD2P25440 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRD2P25440 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRD2P25440 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BRD2P25440 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
BRD2P25440 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.89■□□□□ 0.77
BRD2P25440 WIZP1-201ENST00000531444 2299 ntBASIC19.89■□□□□ 0.77
BRD2P25440 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
BRD2P25440 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BRD2P25440 FAM87A-204ENST00000613235 858 ntBASIC19.89■□□□□ 0.77
BRD2P25440 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms