Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HLA-DOBP13765 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DOBP13765 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DOBP13765 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 MMP23A-201ENST00000234610 1017 ntBASIC16.66■□□□□ 0.26
HLA-DOBP13765 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HLA-DOBP13765 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DOBP13765 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 MIR564-202ENST00000385049 94 ntBASIC16.66■□□□□ 0.26
HLA-DOBP13765 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DOBP13765 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DOBP13765 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DOBP13765 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DOBP13765 AC010947.1-201ENST00000623454 693 ntBASIC16.66■□□□□ 0.26
HLA-DOBP13765 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DOBP13765 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.66■□□□□ 0.26
HLA-DOBP13765 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DOBP13765 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HLA-DOBP13765 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DOBP13765 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DOBP13765 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DOBP13765 AC036111.1-201ENST00000533973 1582 ntBASIC16.65■□□□□ 0.26
HLA-DOBP13765 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DOBP13765 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DOBP13765 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DOBP13765 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DOBP13765 AC007663.1-201ENST00000438948 1240 ntBASIC16.65■□□□□ 0.26
HLA-DOBP13765 CCR12P-201ENST00000446203 998 ntBASIC16.65■□□□□ 0.26
HLA-DOBP13765 TSPY17P-201ENST00000450329 467 ntBASIC16.65■□□□□ 0.26
HLA-DOBP13765 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DOBP13765 C2orf69P3-201ENST00000565542 1120 ntBASIC16.65■□□□□ 0.26
HLA-DOBP13765 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.65■□□□□ 0.26
HLA-DOBP13765 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DOBP13765 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DOBP13765 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DOBP13765 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DOBP13765 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DOBP13765 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DOBP13765 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-DOBP13765 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DOBP13765 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DOBP13765 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DOBP13765 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HLA-DOBP13765 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HLA-DOBP13765 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DOBP13765 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
HLA-DOBP13765 AC099343.3-201ENST00000605834 2503 ntBASIC16.64■□□□□ 0.25
HLA-DOBP13765 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DOBP13765 KRT8P45-201ENST00000414328 1447 ntBASIC16.64■□□□□ 0.25
HLA-DOBP13765 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DOBP13765 AC007613.1-201ENST00000572811 2597 ntBASIC16.64■□□□□ 0.25
HLA-DOBP13765 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DOBP13765 AC073592.3-201ENST00000625118 1834 ntBASIC16.64■□□□□ 0.25
HLA-DOBP13765 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DOBP13765 TSPY14P-201ENST00000303979 915 ntBASIC16.64■□□□□ 0.25
HLA-DOBP13765 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DOBP13765 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DOBP13765 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DOBP13765 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DOBP13765 AC116562.4-202ENST00000641738 218 ntBASIC16.64■□□□□ 0.25
HLA-DOBP13765 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DOBP13765 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DOBP13765 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
HLA-DOBP13765 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DOBP13765 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DOBP13765 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HLA-DOBP13765 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
HLA-DOBP13765 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DOBP13765 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DOBP13765 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DOBP13765 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.63■□□□□ 0.25
HLA-DOBP13765 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DOBP13765 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HLA-DOBP13765 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
HLA-DOBP13765 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DOBP13765 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DOBP13765 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DOBP13765 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DOBP13765 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DOBP13765 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DOBP13765 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DOBP13765 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DOBP13765 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DOBP13765 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DOBP13765 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DOBP13765 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
HLA-DOBP13765 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms