Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CYP3A4P08684 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CYP3A4P08684 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CYP3A4P08684 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.87■□□□□ 0.93
CYP3A4P08684 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CYP3A4P08684 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.87■□□□□ 0.93
CYP3A4P08684 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
CYP3A4P08684 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.87■□□□□ 0.93
CYP3A4P08684 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.87■□□□□ 0.93
CYP3A4P08684 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.87■□□□□ 0.93
CYP3A4P08684 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CYP3A4P08684 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.87■□□□□ 0.93
CYP3A4P08684 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CYP3A4P08684 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.87■□□□□ 0.93
CYP3A4P08684 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CYP3A4P08684 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CYP3A4P08684 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
CYP3A4P08684 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CYP3A4P08684 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CYP3A4P08684 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CYP3A4P08684 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.86■□□□□ 0.93
CYP3A4P08684 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CYP3A4P08684 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CYP3A4P08684 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CYP3A4P08684 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CYP3A4P08684 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CYP3A4P08684 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.86■□□□□ 0.93
CYP3A4P08684 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.86■□□□□ 0.93
CYP3A4P08684 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.86■□□□□ 0.93
CYP3A4P08684 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CYP3A4P08684 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CYP3A4P08684 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CYP3A4P08684 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CYP3A4P08684 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CYP3A4P08684 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CYP3A4P08684 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CYP3A4P08684 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CYP3A4P08684 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.85■□□□□ 0.93
CYP3A4P08684 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CYP3A4P08684 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 AC093503.3-201ENST00000624917 2352 ntBASIC20.85■□□□□ 0.93
CYP3A4P08684 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
CYP3A4P08684 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.85■□□□□ 0.93
CYP3A4P08684 AL645929.1-201ENST00000420084 975 ntBASIC20.85■□□□□ 0.93
CYP3A4P08684 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.85■□□□□ 0.93
CYP3A4P08684 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.85■□□□□ 0.93
CYP3A4P08684 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.85■□□□□ 0.93
CYP3A4P08684 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.85■□□□□ 0.93
CYP3A4P08684 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CYP3A4P08684 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
CYP3A4P08684 AL162741.1-201ENST00000565563 1558 ntBASIC20.85■□□□□ 0.93
CYP3A4P08684 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.85■□□□□ 0.93
CYP3A4P08684 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CYP3A4P08684 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CYP3A4P08684 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CYP3A4P08684 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.84■□□□□ 0.93
CYP3A4P08684 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CYP3A4P08684 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.84■□□□□ 0.93
CYP3A4P08684 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CYP3A4P08684 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CYP3A4P08684 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CYP3A4P08684 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.84■□□□□ 0.93
CYP3A4P08684 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CYP3A4P08684 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CYP3A4P08684 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.84■□□□□ 0.93
CYP3A4P08684 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.84■□□□□ 0.93
CYP3A4P08684 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CYP3A4P08684 IER3-202ENST00000376377 1350 ntBASIC20.84■□□□□ 0.93
CYP3A4P08684 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CYP3A4P08684 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
CYP3A4P08684 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.83■□□□□ 0.93
CYP3A4P08684 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.83■□□□□ 0.93
CYP3A4P08684 KRT89P-201ENST00000620027 1478 ntBASIC20.83■□□□□ 0.93
CYP3A4P08684 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CYP3A4P08684 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CYP3A4P08684 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.83■□□□□ 0.93
CYP3A4P08684 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.83■□□□□ 0.93
CYP3A4P08684 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.83■□□□□ 0.93
CYP3A4P08684 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.83■□□□□ 0.93
CYP3A4P08684 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CYP3A4P08684 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
CYP3A4P08684 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.83■□□□□ 0.92
CYP3A4P08684 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CYP3A4P08684 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms