Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PFDN1O60925 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.65■□□□□ 0.26
PFDN1O60925 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.65■□□□□ 0.26
PFDN1O60925 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.65■□□□□ 0.26
PFDN1O60925 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PFDN1O60925 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.65■□□□□ 0.26
PFDN1O60925 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PFDN1O60925 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PFDN1O60925 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PFDN1O60925 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PFDN1O60925 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PFDN1O60925 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PFDN1O60925 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
PFDN1O60925 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.64■□□□□ 0.25
PFDN1O60925 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PFDN1O60925 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.64■□□□□ 0.25
PFDN1O60925 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.64■□□□□ 0.25
PFDN1O60925 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN1O60925 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN1O60925 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN1O60925 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.64■□□□□ 0.25
PFDN1O60925 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PFDN1O60925 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN1O60925 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN1O60925 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PFDN1O60925 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PFDN1O60925 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.64■□□□□ 0.25
PFDN1O60925 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PFDN1O60925 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.63■□□□□ 0.25
PFDN1O60925 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN1O60925 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.63■□□□□ 0.25
PFDN1O60925 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.63■□□□□ 0.25
PFDN1O60925 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.63■□□□□ 0.25
PFDN1O60925 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN1O60925 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN1O60925 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.63■□□□□ 0.25
PFDN1O60925 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN1O60925 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PFDN1O60925 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PFDN1O60925 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN1O60925 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PFDN1O60925 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN1O60925 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN1O60925 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN1O60925 GPX1-201ENST00000419349 1106 ntBASIC16.63■□□□□ 0.25
PFDN1O60925 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.63■□□□□ 0.25
PFDN1O60925 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN1O60925 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.63■□□□□ 0.25
PFDN1O60925 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PFDN1O60925 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.63■□□□□ 0.25
PFDN1O60925 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PFDN1O60925 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PFDN1O60925 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN1O60925 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN1O60925 LINC00602-201ENST00000629776 2065 ntBASIC16.63■□□□□ 0.25
PFDN1O60925 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PFDN1O60925 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
PFDN1O60925 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.63■□□□□ 0.25
PFDN1O60925 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.62■□□□□ 0.25
PFDN1O60925 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PFDN1O60925 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PFDN1O60925 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
PFDN1O60925 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PFDN1O60925 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms