Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC188H7C350 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC188H7C350 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC188H7C350 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC188H7C350 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC188H7C350 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC188H7C350 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC188H7C350 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC188H7C350 SIRPAP1-201ENST00000448467 1770 ntBASIC19.34■□□□□ 0.69
CCDC188H7C350 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC188H7C350 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC188H7C350 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC188H7C350 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
CCDC188H7C350 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC188H7C350 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC188H7C350 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
CCDC188H7C350 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CCDC188H7C350 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC188H7C350 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC188H7C350 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC188H7C350 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC188H7C350 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC188H7C350 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC188H7C350 KRT18P41-201ENST00000518924 1277 ntBASIC19.34■□□□□ 0.69
CCDC188H7C350 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC188H7C350 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC188H7C350 AL138781.1-201ENST00000566567 1274 ntBASIC19.34■□□□□ 0.69
CCDC188H7C350 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC188H7C350 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC188H7C350 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC188H7C350 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC188H7C350 PRORSD1P-202ENST00000563365 2154 ntBASIC19.34■□□□□ 0.69
CCDC188H7C350 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC188H7C350 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC188H7C350 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC188H7C350 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC188H7C350 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC188H7C350 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC188H7C350 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC188H7C350 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC188H7C350 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CCDC188H7C350 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC188H7C350 HTR7P1-201ENST00000538670 1336 ntBASIC19.33■□□□□ 0.69
CCDC188H7C350 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC188H7C350 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC188H7C350 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC188H7C350 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC188H7C350 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC188H7C350 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC188H7C350 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC188H7C350 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC188H7C350 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC188H7C350 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC188H7C350 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CCDC188H7C350 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC188H7C350 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC188H7C350 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC188H7C350 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC188H7C350 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC188H7C350 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC188H7C350 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC188H7C350 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC188H7C350 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC188H7C350 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC188H7C350 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC188H7C350 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC188H7C350 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC188H7C350 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CCDC188H7C350 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC188H7C350 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC188H7C350 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC188H7C350 HTR7P1-202ENST00000624664 4411 ntBASIC19.32■□□□□ 0.68
CCDC188H7C350 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC188H7C350 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC188H7C350 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC188H7C350 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC188H7C350 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC188H7C350 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC188H7C350 AC098934.4-201ENST00000564127 592 ntBASIC19.32■□□□□ 0.68
CCDC188H7C350 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC188H7C350 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC188H7C350 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC188H7C350 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC188H7C350 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC188H7C350 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC188H7C350 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC188H7C350 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC188H7C350 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC188H7C350 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC188H7C350 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC188H7C350 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms