Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 AC006970.2-201ENST00000450065 779 ntBASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 LINC00896-202ENST00000609602 2128 ntBASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2D4Q9Y2X8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 AC093677.2-201ENST00000600169 1863 ntBASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 KRT8P45-201ENST00000414328 1447 ntBASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 AC138028.4-201ENST00000564984 1845 ntBASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2D4Q9Y2X8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 GUSBP6-202ENST00000438529 1198 ntBASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms