Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 AL355075.4-201ENST00000554988 638 ntBASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 FITM1-202ENST00000559294 800 ntBASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLK4Q9HAZ1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 SDHAP1-207ENST00000440850 2000 ntBASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 AC008040.2-201ENST00000461049 708 ntBASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.1■□□□□ 0.49
CLK4Q9HAZ1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 CA15P1-201ENST00000481698 905 ntBASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 AC097488.1-201ENST00000507834 756 ntBASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 CKBP1-201ENST00000565489 1086 ntBASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.09■□□□□ 0.49
CLK4Q9HAZ1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLK4Q9HAZ1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CLK4Q9HAZ1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.08■□□□□ 0.49
CLK4Q9HAZ1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLK4Q9HAZ1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLK4Q9HAZ1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CLK4Q9HAZ1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLK4Q9HAZ1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLK4Q9HAZ1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLK4Q9HAZ1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLK4Q9HAZ1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLK4Q9HAZ1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.08■□□□□ 0.48
CLK4Q9HAZ1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.08■□□□□ 0.48
CLK4Q9HAZ1 AL031598.1-201ENST00000561511 1773 ntBASIC18.08■□□□□ 0.48
CLK4Q9HAZ1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms