Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
KRTAP3-1Q9BYR8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 PP12613-201ENST00000424958 2230 ntBASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 AC012317.2-201ENST00000623305 2251 ntBASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 AL035696.2-201ENST00000407941 709 ntBASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 NCF1B-203ENST00000435988 1254 ntBASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 UNC93B4-201ENST00000505679 747 ntBASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 AC137695.1-201ENST00000604126 489 ntBASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 MYC-208ENST00000641036 567 ntBASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC9.44□□□□□ -0.9
KRTAP3-1Q9BYR8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 MYLKP1-201ENST00000509077 1580 ntBASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP3-1Q9BYR8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms