Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.7■□□□□ 0.74
CALR3Q96L12 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 RCC2P3-201ENST00000418112 1537 ntBASIC19.7■□□□□ 0.74
CALR3Q96L12 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.7■□□□□ 0.74
CALR3Q96L12 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CALR3Q96L12 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.7■□□□□ 0.74
CALR3Q96L12 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CALR3Q96L12 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.7■□□□□ 0.74
CALR3Q96L12 MYLKP1-201ENST00000509077 1580 ntBASIC19.7■□□□□ 0.74
CALR3Q96L12 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CALR3Q96L12 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.69■□□□□ 0.74
CALR3Q96L12 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.69■□□□□ 0.74
CALR3Q96L12 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 AL499627.1-201ENST00000569373 2188 ntBASIC19.69■□□□□ 0.74
CALR3Q96L12 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CALR3Q96L12 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CALR3Q96L12 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 HLA-L-209ENST00000420110 1011 ntBASIC19.69■□□□□ 0.74
CALR3Q96L12 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.69■□□□□ 0.74
CALR3Q96L12 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CALR3Q96L12 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.69■□□□□ 0.74
CALR3Q96L12 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.69■□□□□ 0.74
CALR3Q96L12 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.69■□□□□ 0.74
CALR3Q96L12 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CALR3Q96L12 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CALR3Q96L12 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CALR3Q96L12 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.68■□□□□ 0.74
CALR3Q96L12 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CALR3Q96L12 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.68■□□□□ 0.74
CALR3Q96L12 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.68■□□□□ 0.74
CALR3Q96L12 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CALR3Q96L12 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CALR3Q96L12 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CALR3Q96L12 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CALR3Q96L12 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.68■□□□□ 0.74
CALR3Q96L12 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CALR3Q96L12 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CALR3Q96L12 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CALR3Q96L12 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CALR3Q96L12 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.68■□□□□ 0.74
CALR3Q96L12 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CALR3Q96L12 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.68■□□□□ 0.74
CALR3Q96L12 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CALR3Q96L12 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CALR3Q96L12 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CALR3Q96L12 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CALR3Q96L12 AC130371.2-201ENST00000619443 611 ntBASIC19.68■□□□□ 0.74
CALR3Q96L12 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.68■□□□□ 0.74
CALR3Q96L12 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CALR3Q96L12 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.68■□□□□ 0.74
CALR3Q96L12 BCL2-203ENST00000589955 5011 ntBASIC19.68■□□□□ 0.74
CALR3Q96L12 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CALR3Q96L12 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CALR3Q96L12 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CALR3Q96L12 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.68■□□□□ 0.74
CALR3Q96L12 AC008556.1-201ENST00000610908 2040 ntBASIC19.68■□□□□ 0.74
CALR3Q96L12 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CALR3Q96L12 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CALR3Q96L12 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.67■□□□□ 0.74
CALR3Q96L12 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.67■□□□□ 0.74
CALR3Q96L12 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CALR3Q96L12 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CALR3Q96L12 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CALR3Q96L12 ESRRAP1-201ENST00000400596 1257 ntBASIC19.67■□□□□ 0.74
CALR3Q96L12 RPS2P4-201ENST00000476944 856 ntBASIC19.67■□□□□ 0.74
CALR3Q96L12 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms