Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPB3Q92617 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPB3Q92617 HLA-L-209ENST00000420110 1011 ntBASIC14.71□□□□□ -0.05
NPIPB3Q92617 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPB3Q92617 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPB3Q92617 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPB3Q92617 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPB3Q92617 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
NPIPB3Q92617 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.71□□□□□ -0.05
NPIPB3Q92617 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
NPIPB3Q92617 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPB3Q92617 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NPIPB3Q92617 AC131212.4-201ENST00000623606 975 ntBASIC14.71□□□□□ -0.05
NPIPB3Q92617 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NPIPB3Q92617 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NPIPB3Q92617 PCDHB18P-201ENST00000524813 2368 ntBASIC14.71□□□□□ -0.05
NPIPB3Q92617 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPB3Q92617 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
NPIPB3Q92617 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPB3Q92617 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPB3Q92617 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPB3Q92617 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPB3Q92617 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
NPIPB3Q92617 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
NPIPB3Q92617 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 AL162741.1-201ENST00000565563 1558 ntBASIC14.7□□□□□ -0.06
NPIPB3Q92617 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 AC068880.1-201ENST00000507289 2297 ntBASIC14.7□□□□□ -0.06
NPIPB3Q92617 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
NPIPB3Q92617 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPB3Q92617 KRT8P32-201ENST00000512863 1461 ntBASIC14.69□□□□□ -0.06
NPIPB3Q92617 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 PRSS44-201ENST00000515154 1146 ntBASIC14.69□□□□□ -0.06
NPIPB3Q92617 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 AL445675.2-201ENST00000620291 557 ntBASIC14.69□□□□□ -0.06
NPIPB3Q92617 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 MYC-208ENST00000641036 567 ntBASIC14.69□□□□□ -0.06
NPIPB3Q92617 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPB3Q92617 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NPIPB3Q92617 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms