Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SHC3Q92529 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHC3Q92529 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.85■□□□□ 0.77
SHC3Q92529 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHC3Q92529 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHC3Q92529 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHC3Q92529 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SHC3Q92529 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHC3Q92529 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SHC3Q92529 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHC3Q92529 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHC3Q92529 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC3Q92529 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC3Q92529 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
SHC3Q92529 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC3Q92529 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC3Q92529 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHC3Q92529 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC3Q92529 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
SHC3Q92529 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC3Q92529 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.84■□□□□ 0.77
SHC3Q92529 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC3Q92529 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC3Q92529 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.84■□□□□ 0.77
SHC3Q92529 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SHC3Q92529 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SHC3Q92529 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC3Q92529 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHC3Q92529 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SHC3Q92529 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SHC3Q92529 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHC3Q92529 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SHC3Q92529 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHC3Q92529 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHC3Q92529 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SHC3Q92529 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.83■□□□□ 0.77
SHC3Q92529 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.83■□□□□ 0.77
SHC3Q92529 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHC3Q92529 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHC3Q92529 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.83■□□□□ 0.77
SHC3Q92529 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SHC3Q92529 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SHC3Q92529 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.83■□□□□ 0.77
SHC3Q92529 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.83■□□□□ 0.77
SHC3Q92529 FAM87A-204ENST00000613235 858 ntBASIC19.83■□□□□ 0.77
SHC3Q92529 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SHC3Q92529 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHC3Q92529 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.83■□□□□ 0.76
SHC3Q92529 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHC3Q92529 KRT8P7-201ENST00000533003 1432 ntBASIC19.83■□□□□ 0.76
SHC3Q92529 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHC3Q92529 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SHC3Q92529 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SHC3Q92529 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.83■□□□□ 0.76
SHC3Q92529 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SHC3Q92529 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.83■□□□□ 0.76
SHC3Q92529 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.82■□□□□ 0.76
SHC3Q92529 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.82■□□□□ 0.76
SHC3Q92529 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SHC3Q92529 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.82■□□□□ 0.76
SHC3Q92529 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.82■□□□□ 0.76
SHC3Q92529 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SHC3Q92529 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
SHC3Q92529 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.82■□□□□ 0.76
SHC3Q92529 AC128688.1-201ENST00000487626 519 ntBASIC19.82■□□□□ 0.76
SHC3Q92529 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.82■□□□□ 0.76
SHC3Q92529 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.82■□□□□ 0.76
SHC3Q92529 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.82■□□□□ 0.76
SHC3Q92529 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
SHC3Q92529 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.82■□□□□ 0.76
SHC3Q92529 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.82■□□□□ 0.76
SHC3Q92529 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.82■□□□□ 0.76
SHC3Q92529 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.82■□□□□ 0.76
SHC3Q92529 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SHC3Q92529 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
SHC3Q92529 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SHC3Q92529 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.81■□□□□ 0.76
SHC3Q92529 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHC3Q92529 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHC3Q92529 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SHC3Q92529 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHC3Q92529 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms