Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.78■□□□□ 0.6
CHD5Q8TDI0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 AL138781.2-201ENST00000617896 1843 ntBASIC18.78■□□□□ 0.6
CHD5Q8TDI0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD5Q8TDI0 ESPNP-201ENST00000270691 2015 ntBASIC18.77■□□□□ 0.6
CHD5Q8TDI0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD5Q8TDI0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHD5Q8TDI0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHD5Q8TDI0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHD5Q8TDI0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.77■□□□□ 0.59
CHD5Q8TDI0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHD5Q8TDI0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.77■□□□□ 0.59
CHD5Q8TDI0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHD5Q8TDI0 FAM86EP-206ENST00000510506 987 ntBASIC18.77■□□□□ 0.59
CHD5Q8TDI0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.77■□□□□ 0.59
CHD5Q8TDI0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.77■□□□□ 0.59
CHD5Q8TDI0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.77■□□□□ 0.59
CHD5Q8TDI0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHD5Q8TDI0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHD5Q8TDI0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 AL645929.1-201ENST00000420084 975 ntBASIC18.76■□□□□ 0.59
CHD5Q8TDI0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD5Q8TDI0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 AC140113.3-201ENST00000605663 199 ntBASIC18.75■□□□□ 0.59
CHD5Q8TDI0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 AC004408.2-201ENST00000623613 2777 ntBASIC18.75■□□□□ 0.59
CHD5Q8TDI0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD5Q8TDI0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms