Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5Q00535 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5Q00535 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5Q00535 REXO1L9P-201ENST00000604264 2108 ntBASIC16.82■□□□□ 0.28
CDK5Q00535 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5Q00535 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDK5Q00535 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5Q00535 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5Q00535 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5Q00535 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5Q00535 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDK5Q00535 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.81■□□□□ 0.28
CDK5Q00535 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5Q00535 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5Q00535 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.81■□□□□ 0.28
CDK5Q00535 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5Q00535 HTR7P1-201ENST00000538670 1336 ntBASIC16.81■□□□□ 0.28
CDK5Q00535 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDK5Q00535 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDK5Q00535 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK5Q00535 AC004980.1-204ENST00000429707 299 ntBASIC16.81■□□□□ 0.28
CDK5Q00535 KRT18P41-201ENST00000518924 1277 ntBASIC16.81■□□□□ 0.28
CDK5Q00535 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5Q00535 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5Q00535 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
CDK5Q00535 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5Q00535 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5Q00535 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.81■□□□□ 0.28
CDK5Q00535 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5Q00535 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5Q00535 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5Q00535 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5Q00535 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDK5Q00535 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDK5Q00535 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDK5Q00535 RCC2P3-201ENST00000418112 1537 ntBASIC16.8■□□□□ 0.28
CDK5Q00535 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.8■□□□□ 0.28
CDK5Q00535 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDK5Q00535 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5Q00535 KRT17P3-201ENST00000420566 1262 ntBASIC16.8■□□□□ 0.28
CDK5Q00535 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CDK5Q00535 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.8■□□□□ 0.28
CDK5Q00535 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.8■□□□□ 0.28
CDK5Q00535 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.8■□□□□ 0.28
CDK5Q00535 AC069544.1-201ENST00000609399 999 ntBASIC16.8■□□□□ 0.28
CDK5Q00535 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.8■□□□□ 0.28
CDK5Q00535 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
CDK5Q00535 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDK5Q00535 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5Q00535 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5Q00535 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CDK5Q00535 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5Q00535 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.79■□□□□ 0.28
CDK5Q00535 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDK5Q00535 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5Q00535 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.79■□□□□ 0.28
CDK5Q00535 AC091390.4-202ENST00000476426 537 ntBASIC16.79■□□□□ 0.28
CDK5Q00535 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.79■□□□□ 0.28
CDK5Q00535 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5Q00535 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.79■□□□□ 0.28
CDK5Q00535 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5Q00535 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5Q00535 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5Q00535 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5Q00535 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5Q00535 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.79■□□□□ 0.28
CDK5Q00535 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5Q00535 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDK5Q00535 FLJ13224-201ENST00000313737 1514 ntBASIC16.79■□□□□ 0.28
CDK5Q00535 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5Q00535 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5Q00535 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5Q00535 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5Q00535 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5Q00535 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5Q00535 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.78■□□□□ 0.28
CDK5Q00535 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CDK5Q00535 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.78■□□□□ 0.28
CDK5Q00535 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5Q00535 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5Q00535 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5Q00535 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CDK5Q00535 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5Q00535 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5Q00535 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5Q00535 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms