Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN12P56749 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN12P56749 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN12P56749 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CLDN12P56749 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN12P56749 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN12P56749 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.2■□□□□ 0.18
CLDN12P56749 GNAS-203ENST00000306120 1878 ntBASIC16.2■□□□□ 0.18
CLDN12P56749 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN12P56749 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CLDN12P56749 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 AC099398.1-201ENST00000567919 2776 ntBASIC16.19■□□□□ 0.18
CLDN12P56749 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CLDN12P56749 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN12P56749 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN12P56749 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN12P56749 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN12P56749 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN12P56749 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN12P56749 AC022517.1-201ENST00000592429 346 ntBASIC16.19■□□□□ 0.18
CLDN12P56749 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN12P56749 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 AC120498.8-201ENST00000614275 531 ntBASIC16.19■□□□□ 0.18
CLDN12P56749 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN12P56749 AL121829.2-201ENST00000620908 328 ntBASIC16.19■□□□□ 0.18
CLDN12P56749 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN12P56749 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN12P56749 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN12P56749 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN12P56749 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN12P56749 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLDN12P56749 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN12P56749 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLDN12P56749 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN12P56749 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN12P56749 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN12P56749 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN12P56749 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN12P56749 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN12P56749 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN12P56749 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN12P56749 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLDN12P56749 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN12P56749 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN12P56749 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN12P56749 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLDN12P56749 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN12P56749 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN12P56749 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN12P56749 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.17■□□□□ 0.18
CLDN12P56749 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN12P56749 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN12P56749 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN12P56749 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN12P56749 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN12P56749 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.17■□□□□ 0.18
CLDN12P56749 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN12P56749 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN12P56749 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.17■□□□□ 0.18
CLDN12P56749 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN12P56749 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CLDN12P56749 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLDN12P56749 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN12P56749 CDCA4P2-201ENST00000441182 718 ntBASIC16.17■□□□□ 0.18
CLDN12P56749 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms