Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
WNT3AP56704 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
WNT3AP56704 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
WNT3AP56704 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
WNT3AP56704 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
WNT3AP56704 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
WNT3AP56704 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
WNT3AP56704 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
WNT3AP56704 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
WNT3AP56704 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.8■□□□□ 0.6
WNT3AP56704 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.8■□□□□ 0.6
WNT3AP56704 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.8■□□□□ 0.6
WNT3AP56704 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.8■□□□□ 0.6
WNT3AP56704 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
WNT3AP56704 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
WNT3AP56704 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
WNT3AP56704 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
WNT3AP56704 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
WNT3AP56704 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
WNT3AP56704 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
WNT3AP56704 MYLKP1-201ENST00000509077 1580 ntBASIC18.8■□□□□ 0.6
WNT3AP56704 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
WNT3AP56704 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.79■□□□□ 0.6
WNT3AP56704 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.79■□□□□ 0.6
WNT3AP56704 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
WNT3AP56704 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
WNT3AP56704 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.79■□□□□ 0.6
WNT3AP56704 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
WNT3AP56704 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.79■□□□□ 0.6
WNT3AP56704 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.79■□□□□ 0.6
WNT3AP56704 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
WNT3AP56704 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.79■□□□□ 0.6
WNT3AP56704 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.79■□□□□ 0.6
WNT3AP56704 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.79■□□□□ 0.6
WNT3AP56704 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.79■□□□□ 0.6
WNT3AP56704 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
WNT3AP56704 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
WNT3AP56704 NEFHP1-201ENST00000412845 2629 ntBASIC18.79■□□□□ 0.6
WNT3AP56704 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
WNT3AP56704 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.78■□□□□ 0.6
WNT3AP56704 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.78■□□□□ 0.6
WNT3AP56704 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
WNT3AP56704 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.78■□□□□ 0.6
WNT3AP56704 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.78■□□□□ 0.6
WNT3AP56704 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.78■□□□□ 0.6
WNT3AP56704 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.78■□□□□ 0.6
WNT3AP56704 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.78■□□□□ 0.6
WNT3AP56704 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.78■□□□□ 0.6
WNT3AP56704 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.78■□□□□ 0.6
WNT3AP56704 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
WNT3AP56704 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.78■□□□□ 0.6
WNT3AP56704 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.78■□□□□ 0.6
WNT3AP56704 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.78■□□□□ 0.6
WNT3AP56704 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.78■□□□□ 0.6
WNT3AP56704 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
WNT3AP56704 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.78■□□□□ 0.6
WNT3AP56704 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
WNT3AP56704 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
WNT3AP56704 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.77■□□□□ 0.6
WNT3AP56704 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
WNT3AP56704 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
WNT3AP56704 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
WNT3AP56704 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
WNT3AP56704 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
WNT3AP56704 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.77■□□□□ 0.6
WNT3AP56704 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms