Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.55■□□□□ 0.88
GPC3P51654 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.55■□□□□ 0.88
GPC3P51654 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.55■□□□□ 0.88
GPC3P51654 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
GPC3P51654 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.55■□□□□ 0.88
GPC3P51654 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC3P51654 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.54■□□□□ 0.88
GPC3P51654 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.54■□□□□ 0.88
GPC3P51654 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.54■□□□□ 0.88
GPC3P51654 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.54■□□□□ 0.88
GPC3P51654 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.54■□□□□ 0.88
GPC3P51654 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.54■□□□□ 0.88
GPC3P51654 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.54■□□□□ 0.88
GPC3P51654 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GPC3P51654 AC006333.2-201ENST00000607957 2099 ntBASIC20.54■□□□□ 0.88
GPC3P51654 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
GPC3P51654 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GPC3P51654 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
GPC3P51654 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.53■□□□□ 0.88
GPC3P51654 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.53■□□□□ 0.88
GPC3P51654 AC093458.2-201ENST00000623150 629 ntBASIC20.53■□□□□ 0.88
GPC3P51654 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.53■□□□□ 0.88
GPC3P51654 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GPC3P51654 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.53■□□□□ 0.88
GPC3P51654 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.53■□□□□ 0.88
GPC3P51654 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GPC3P51654 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.53■□□□□ 0.88
GPC3P51654 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.53■□□□□ 0.88
GPC3P51654 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.53■□□□□ 0.88
GPC3P51654 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GPC3P51654 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC3P51654 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GPC3P51654 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC3P51654 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC3P51654 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
GPC3P51654 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC3P51654 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC3P51654 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GPC3P51654 AL645929.1-201ENST00000420084 975 ntBASIC20.52■□□□□ 0.88
GPC3P51654 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
GPC3P51654 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.52■□□□□ 0.88
GPC3P51654 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.52■□□□□ 0.88
GPC3P51654 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.52■□□□□ 0.88
GPC3P51654 AC104390.1-201ENST00000555663 520 ntBASIC20.52■□□□□ 0.88
GPC3P51654 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.52■□□□□ 0.88
GPC3P51654 AC069148.1-201ENST00000608741 768 ntBASIC20.52■□□□□ 0.88
GPC3P51654 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.52■□□□□ 0.88
GPC3P51654 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GPC3P51654 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.52■□□□□ 0.88
GPC3P51654 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GPC3P51654 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
GPC3P51654 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GPC3P51654 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
GPC3P51654 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GPC3P51654 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GPC3P51654 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GPC3P51654 RNF165-205ENST00000588679 2904 ntBASIC20.51■□□□□ 0.87
GPC3P51654 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.51■□□□□ 0.87
GPC3P51654 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
GPC3P51654 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
GPC3P51654 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GPC3P51654 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GPC3P51654 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GPC3P51654 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.51■□□□□ 0.87
GPC3P51654 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GPC3P51654 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms